Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 DEFB109D-201ENST00000529497 240 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 MTND1P24-201ENST00000552175 861 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC011270.1-201ENST00000558606 583 ntBASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SNED1Q8TER0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNED1Q8TER0 MIR634-201ENST00000385208 97 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC096664.2-201ENST00000411843 406 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AL590623.1-201ENST00000427864 105 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 RPL21P110-201ENST00000433345 446 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 RN7SL585P-201ENST00000470538 280 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 RPL31P61-201ENST00000496160 376 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC018442.3-201ENST00000523025 183 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AP001372.4-201ENST00000524889 472 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 ZNF92P2-201ENST00000600543 1059 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 BNIP3P38-201ENST00000601117 544 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 SNORA62.6-201ENST00000606322 83 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AL162233.1-201ENST00000620014 944 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 OR4G3P-201ENST00000633500 913 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 CU459211.1-201ENST00000635667 749 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNED1Q8TER0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNED1Q8TER0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNED1Q8TER0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNED1Q8TER0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNED1Q8TER0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 RN7SKP177-201ENST00000410567 355 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 SSR1P2-201ENST00000415208 787 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC092447.3-201ENST00000426027 686 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 DPY19L1P2-201ENST00000426647 915 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC005326.1-201ENST00000429197 123 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 ATP5JP1-201ENST00000431631 322 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 HMGB1P37-201ENST00000439613 609 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 TPTE2P3-201ENST00000441562 1189 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC025768.1-201ENST00000510057 267 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 RN7SKP57-201ENST00000517248 293 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC008802.1-201ENST00000519121 791 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 RANP9-201ENST00000519957 271 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC112220.2-201ENST00000605513 533 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 AC140725.3-201ENST00000616193 880 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 AP001005.3-201ENST00000622049 129 ntBASIC4.63□□□□□ -1.67
SNED1Q8TER0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNED1Q8TER0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNED1Q8TER0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SNED1Q8TER0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SNED1Q8TER0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.62□□□□□ -1.67
SNED1Q8TER0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNED1Q8TER0 AC007823.1-201ENST00000569932 1566 ntBASIC4.62□□□□□ -1.67
SNED1Q8TER0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNED1Q8TER0 MTCO1P4-201ENST00000520516 1409 ntBASIC4.62□□□□□ -1.67
SNED1Q8TER0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNED1Q8TER0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.62□□□□□ -1.67
SNED1Q8TER0 RNU1-108P-201ENST00000362556 161 ntBASIC4.62□□□□□ -1.67
SNED1Q8TER0 SNORD9-201ENST00000362566 104 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms