Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLDND2Q8NHS1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDND2Q8NHS1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 SNORD3H-201ENST00000384486 214 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 MIR199A2-201ENST00000385289 110 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 RNA5SP44-201ENST00000410446 133 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC091286.1-201ENST00000431233 461 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 EIF4A1P11-201ENST00000451239 222 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 OR6C72P-201ENST00000451403 892 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 CLIC4P1-201ENST00000453177 535 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 CDH12P2-201ENST00000504393 298 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 RNA5SP164-201ENST00000516533 110 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 GTF2IP22-201ENST00000554443 182 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC068446.3-201ENST00000555285 382 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AL121576.1-201ENST00000556055 276 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AGGF1P8-201ENST00000562979 1000 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 MIR3944-201ENST00000581277 108 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AC006946.3-201ENST00000609791 756 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 AL391261.4-201ENST00000616012 481 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 PHKBP1-201ENST00000450951 1951 ntBASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDND2Q8NHS1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC024560.2-201ENST00000507981 1497 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 MIR7-3-201ENST00000384898 110 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC007066.1-201ENST00000392902 381 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 HSPE1P8-201ENST00000406997 288 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC002075.2-201ENST00000425207 252 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 RPS6P12-201ENST00000432491 726 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 RPL6P5-201ENST00000445678 828 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AL354710.1-201ENST00000453641 246 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 snoU13.22-201ENST00000459428 104 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC004801.2-202ENST00000463559 283 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC022336.1-201ENST00000475510 337 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC007991.1-201ENST00000522680 631 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 BRDTP1-201ENST00000605735 677 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 RNVU1-4-201ENST00000612985 164 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC009093.8-201ENST00000641769 292 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 AC110792.3-201ENST00000595906 1614 ntBASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDND2Q8NHS1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 AC009313.2-201ENST00000417893 1941 ntBASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDND2Q8NHS1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms