Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 USP9YP28-201ENST00000435142 589 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL354941.1-201ENST00000438600 464 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 ISCA1P2-201ENST00000438679 421 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 MTCYBP34-201ENST00000439552 670 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC009263.1-201ENST00000441193 1239 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 CEACAMP7-201ENST00000444105 496 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 RPS5P7-201ENST00000456664 608 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC006967.1-201ENST00000467608 589 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 SYPL1P1-201ENST00000473622 768 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 RN7SL214P-201ENST00000487317 265 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 MTCYBP16-201ENST00000509187 1129 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 VWA8P1-201ENST00000510889 176 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC116353.3-201ENST00000511215 249 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC008837.2-201ENST00000513076 418 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 RNU1-6P-201ENST00000516290 144 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC209154.1-201ENST00000582156 337 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC135507.1-201ENST00000607214 561 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC055764.2-201ENST00000610089 670 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AP000894.4-201ENST00000610185 483 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC026585.1-201ENST00000619582 524 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AP001005.3-201ENST00000622049 129 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL031119.1-201ENST00000404707 1879 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 IGKV7-3-201ENST00000357453 298 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 RNA5SP513-201ENST00000364648 118 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 OR1L1-202ENST00000373686 1083 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 SNORA51.8-201ENST00000384234 132 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AL590084.2-201ENST00000401481 382 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AL645733.1-201ENST00000402250 217 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AL021407.1-201ENST00000404531 386 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 CEACAMP8-201ENST00000413902 580 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 TIMM9P2-201ENST00000419324 266 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 PAICSP7-201ENST00000419829 962 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC048351.1-201ENST00000420064 602 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 GTF2IP23-201ENST00000423746 351 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AL589823.1-201ENST00000429577 183 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 ATP5F1P1-201ENST00000433775 569 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 GTF2IP7-202ENST00000436677 309 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 MTND3P1-201ENST00000441336 220 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 RPL23AP76-201ENST00000441860 458 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 NPM1P39-201ENST00000449818 867 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC079776.3-201ENST00000450665 370 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC073522.1-201ENST00000483312 377 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 SCARNA22-201ENST00000503991 125 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 HIGD1AP17-201ENST00000554576 276 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 MTND6P33-201ENST00000571794 183 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC103987.3-201ENST00000582071 292 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.32□□□□□ -1.72
CLIP4Q8N3C7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms