Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 HSPE1P26-201ENST00000405341 275 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 U3.36-201ENST00000408418 213 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 MIR1183-201ENST00000408856 89 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AL136133.1-201ENST00000413694 376 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 GTF2IP5-201ENST00000414608 731 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 Z75741.2-201ENST00000417272 1167 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AF186996.5-201ENST00000418098 904 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AIMP1P1-201ENST00000418670 937 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 MTND2P16-201ENST00000419987 799 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 FNDC3CP-201ENST00000420795 1155 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 CENPIP1-201ENST00000425713 902 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 VDAC1P6-201ENST00000430062 855 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 USP9YP22-201ENST00000438971 294 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 PTMAP6-201ENST00000439110 327 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RNF2P1-201ENST00000442955 1010 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AL358794.1-201ENST00000445689 381 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC023141.9-201ENST00000458734 412 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RPL21P104-201ENST00000464143 478 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 PABPC1P3-201ENST00000469174 459 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RN7SL717P-201ENST00000478343 297 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC092451.1-201ENST00000480211 153 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 CBX3P5-201ENST00000552017 521 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 YWHAZP1-201ENST00000556286 722 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 MIR5708-201ENST00000579723 85 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC209154.1-201ENST00000582156 337 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AL022067.1-201ENST00000602426 454 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AL512782.1-201ENST00000603093 364 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AL035411.2-201ENST00000604022 421 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC091946.2-201ENST00000606105 291 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC012531.5-201ENST00000611375 151 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 AC008083.4-201ENST00000615076 444 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 SNORA17.5-201ENST00000630429 132 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 Z99496.1-201ENST00000469424 1477 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 RNA5SP428-201ENST00000365129 132 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 RNU6-1181P-201ENST00000384191 106 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL138880.1-201ENST00000405824 642 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL355143.1-201ENST00000407101 841 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 KRR1P1-201ENST00000419430 803 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 RAC1P8-201ENST00000427086 527 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL121776.1-201ENST00000429337 372 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 RPL23AP25-201ENST00000430973 463 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 RPL34P20-201ENST00000442771 351 ntBASIC3.18□□□□□ -1.9
LINC01561Q8N1V8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms