Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
C9orf40Q8IXQ3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
C9orf40Q8IXQ3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL627171.1-201ENST00000618845 1308 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 SNORD56.4-201ENST00000363883 71 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 RNU6-178P-201ENST00000384631 104 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 MIR513A2-201ENST00000385249 127 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 HMGB3P19-201ENST00000403971 560 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 HMGB3P18-201ENST00000406327 590 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL512430.2-201ENST00000406786 339 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 RN7SKP263-201ENST00000411194 309 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 RNU6-603P-201ENST00000411403 107 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL590609.2-201ENST00000421430 368 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 VDAC1P6-201ENST00000430062 855 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 ELOCP18-201ENST00000434209 337 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 ELOCP8-201ENST00000439309 332 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 ELOCP15-201ENST00000442090 332 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 ARL5AP2-201ENST00000444698 533 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC110792.1-201ENST00000491826 472 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 TPT1P3-201ENST00000492841 512 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 IGKV2-38-201ENST00000517443 247 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AP000916.1-201ENST00000533869 835 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 OR8R1P-201ENST00000543943 764 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL360157.1-201ENST00000565962 87 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC022968.1-201ENST00000567372 442 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 HMGB1P50-201ENST00000605814 607 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC112503.2-201ENST00000609005 552 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC243654.2-201ENST00000612843 443 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 U6.48-201ENST00000618523 106 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AP000943.4-201ENST00000622912 357 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC116563.2-201ENST00000624751 535 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AL138960.2-201ENST00000625145 535 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 AC006042.3-201ENST00000454684 1469 ntBASIC3.72□□□□□ -1.81
C9orf40Q8IXQ3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
C9orf40Q8IXQ3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AL450326.2-201ENST00000421913 1962 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AL590290.1-201ENST00000405336 380 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 MIR1193-201ENST00000408109 78 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 RNU6-628P-201ENST00000410675 107 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 HMGB3P31-201ENST00000413333 595 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 NPM1P24-201ENST00000428039 894 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AC012497.1-201ENST00000429392 575 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AC008379.1-201ENST00000463655 464 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 HMGB3P26-201ENST00000560051 582 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AGGF1P6-201ENST00000569213 976 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 ABI1P1-201ENST00000603375 1120 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 OR2BH1P-201ENST00000608850 864 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 VN1R9P-201ENST00000614184 867 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 MIR6500-201ENST00000622700 86 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms