Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 SNORD95-201ENST00000579879 68 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 MIR4503-201ENST00000582187 83 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 LINC02495-203ENST00000636704 242 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 TNPO1P2-201ENST00000426249 2665 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 PABPC1P8-201ENST00000452851 2086 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC023245.2-201ENST00000530760 2978 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AL356421.1-201ENST00000403255 413 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 Y_RNA.605-201ENST00000410577 105 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 RN7SKP296-201ENST00000411185 341 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 RPL36AP36-201ENST00000418616 301 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AL450996.1-201ENST00000445574 1202 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 VN1R38P-201ENST00000450265 887 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC022431.1-201ENST00000450941 438 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 SUMO1P2-201ENST00000452524 304 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 MTND5P22-201ENST00000458380 195 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 ACA64.1-201ENST00000459171 127 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC093267.1-201ENST00000489176 961 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 KLHL2P1-201ENST00000508691 521 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 PTP4A1P4-201ENST00000512479 322 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 SCARNA5-201ENST00000516201 276 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 RN7SKP238-201ENST00000516483 249 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 RN7SKP256-201ENST00000517201 314 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AP006245.2-201ENST00000522004 300 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC004817.2-201ENST00000561794 651 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC026464.5-201ENST00000562497 722 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AP003115.1-201ENST00000569849 463 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 MIR4675-201ENST00000577898 77 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC139493.1-201ENST00000604368 397 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC016925.2-201ENST00000605108 242 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AL355816.1-201ENST00000607951 118 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC073488.3-201ENST00000631611 778 ntBASIC6.74□□□□□ -1.33
RNF135Q8IUD6 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF135Q8IUD6 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 AC073343.1-201ENST00000328239 651 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 MIR369-201ENST00000362155 70 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 RNA5SP477-201ENST00000362639 119 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 DSTNP4-201ENST00000399472 474 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 AL096800.1-201ENST00000405326 893 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 RN7SKP286-201ENST00000410894 299 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 NPM1P40-201ENST00000412758 733 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF135Q8IUD6 CHEK2P3-201ENST00000416118 248 ntBASIC6.73□□□□□ -1.33
RNF135Q8IUD6 MTCO2P27-201ENST00000420740 428 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms