Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TMEM53Q6P2H8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TMEM53Q6P2H8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.76□□□□□ -1.81
TMEM53Q6P2H8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RNA5SP391-201ENST00000363456 119 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RNA5SP509-201ENST00000364577 119 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 MIR184-201ENST00000384962 84 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 SNORD66.1-201ENST00000391230 76 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 Z86062.1-201ENST00000406773 777 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC010385.1-201ENST00000412374 256 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 FAR2P4-202ENST00000425399 584 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC023141.6-201ENST00000429418 337 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RPS3AP54-201ENST00000435535 734 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RPL23AP46-201ENST00000438548 490 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 CBX1P1-201ENST00000440184 427 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 HMGB3P30-201ENST00000457863 606 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC010468.1-201ENST00000461022 817 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RN7SL303P-201ENST00000469773 251 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RNU6-551P-201ENST00000516661 103 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RN7SKP234-201ENST00000517173 224 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AL109766.1-201ENST00000555080 552 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AL354984.3-201ENST00000604803 325 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RMST_8.1-201ENST00000610287 165 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 RNVU1-4-201ENST00000612985 164 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 MIR6864-201ENST00000617935 70 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AL139254.3-201ENST00000641097 674 ntBASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM53Q6P2H8 AL353746.1-201ENST00000566293 6881 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 SNORA27.3-201ENST00000364937 134 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 MIR1179-201ENST00000408703 91 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 RN7SKP285-201ENST00000410137 318 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 ARL5AP2-201ENST00000444698 533 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 RPL37P6-202ENST00000464216 403 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 RPS20P21-201ENST00000466859 343 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC010307.1-201ENST00000467206 836 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AL035404.1-201ENST00000497982 568 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 PHBP14-201ENST00000512887 367 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC093331.1-201ENST00000521474 169 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC068831.4-201ENST00000556118 109 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 PSMB7P1-201ENST00000556349 514 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC006270.2-201ENST00000578523 652 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 IPO5P1-202ENST00000600039 287 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 AC138649.5-201ENST00000637456 137 ntBASIC3.74□□□□□ -1.81
TMEM53Q6P2H8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms