Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 SNORD74.4-201ENST00000364129 80 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 RPS24P12-201ENST00000402084 394 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 PTP4A1P3-201ENST00000433661 420 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AL357552.1-201ENST00000445254 415 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 RPS29P31-201ENST00000446147 164 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 CYP4A43P-201ENST00000568156 121 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 MTND6P33-201ENST00000571794 183 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC127502.3-201ENST00000636170 1206 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 MTCO1P24-201ENST00000515438 1558 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC234772.1-201ENST00000377927 937 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AL139281.1-201ENST00000422120 335 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AL591623.2-201ENST00000449978 222 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AL109933.2-201ENST00000452651 260 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC004924.1-201ENST00000480160 781 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 RPL5P23-201ENST00000496040 868 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC093732.2-201ENST00000607950 274 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 ETF1P3-201ENST00000430422 1160 ntBASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 PSMC1P13-201ENST00000458195 985 ntBASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 AC006445.1-201ENST00000491925 405 ntBASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 AL591424.2-201ENST00000617023 128 ntBASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
VPS13DQ5THJ4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 NMD3P1-201ENST00000439704 1488 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AL356535.1-201ENST00000440335 398 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 HMGB3P13-201ENST00000511263 607 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AC020633.1-201ENST00000468439 2247 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AL024507.1-201ENST00000412741 274 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AC112198.1-201ENST00000505369 1220 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AL021877.2-201ENST00000624442 10684 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 IFNNP1-201ENST00000429219 553 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AC109925.1-201ENST00000478069 331 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AL078595.2-201ENST00000605309 1780 ntBASIC2.27□□□□□ -2.05
VPS13DQ5THJ4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 JKAMPP1-201ENST00000413804 919 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 RNU4-29P-201ENST00000515943 174 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AC027309.2-201ENST00000520566 192 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 AL645568.2-201ENST00000432815 1337 ntBASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13DQ5THJ4 Z83843.1-201ENST00000604070 3685 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms