Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 USP9YP11-201ENST00000427537 717 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 RPS27P18-201ENST00000431701 247 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC092647.3-201ENST00000443044 633 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 RN7SL97P-201ENST00000486780 299 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC005726.1-201ENST00000494679 427 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC025445.1-201ENST00000502728 300 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC021146.5-201ENST00000503544 545 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC034244.1-201ENST00000507687 207 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 MTCO1P30-201ENST00000515244 580 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 RN7SKP31-201ENST00000516354 278 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 RNA5SP392-201ENST00000516905 112 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 RN7SKP147-201ENST00000517154 244 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 RNU6-1261P-201ENST00000517194 104 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AL132657.2-201ENST00000564417 358 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 GAS5-AS1-201ENST00000602767 694 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC119501.1-201ENST00000603646 475 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AL451074.6-201ENST00000608512 729 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC021755.4-201ENST00000616620 456 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC018445.2-201ENST00000622987 260 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 MAPK10-303ENST00000641324 3959 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC109780.1-201ENST00000451768 1344 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC38Q502W7 ELL2P4-201ENST00000446870 1376 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC38Q502W7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC38Q502W7 OR4A15-201ENST00000314706 1035 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 BTBD10P2-201ENST00000404779 676 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 OR4F13P-201ENST00000428478 931 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 snoU13.20-201ENST00000459180 104 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 RN7SL41P-201ENST00000476144 297 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC093270.2-201ENST00000486157 792 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 RPL32P9-201ENST00000487963 407 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC091951.3-201ENST00000504093 246 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 FABP5P12-201ENST00000515543 389 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 RNU6-709P-201ENST00000517257 104 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC026407.1-201ENST00000518369 204 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 MRPS36P3-201ENST00000519284 130 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 LRRC34P1-201ENST00000542742 915 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 ATP5J2P6-201ENST00000565203 266 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC138915.2-201ENST00000569776 97 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 SNORD39.3-201ENST00000584451 71 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC092954.1-201ENST00000609121 445 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AL121612.2-201ENST00000612261 482 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC016769.4-201ENST00000616893 535 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC097520.1-201ENST00000624435 385 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AL356121.2-201ENST00000624715 780 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 BMS1P21-201ENST00000634565 365 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC38Q502W7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC38Q502W7 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 AC107982.1-201ENST00000507171 1300 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms