Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1SQ13698 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.34□□□□□ -1.71
CACNA1SQ13698 AC024341.1-201ENST00000526444 1552 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1SQ13698 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CACNA1SQ13698 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1SQ13698 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CACNA1SQ13698 UBA52P6-201ENST00000399822 382 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 RNF19BPX-201ENST00000426224 625 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 HIGD1AP12-201ENST00000427832 281 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 YWHAEP5-201ENST00000431545 765 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 RPL32P34-201ENST00000486380 400 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 AC096576.1-201ENST00000489014 359 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 BTF3L4P4-201ENST00000506381 449 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 PTGES3P3-201ENST00000511479 482 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 RN7SKP209-201ENST00000516888 304 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.34□□□□□ -1.71
CACNA1SQ13698 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.34□□□□□ -1.71
CACNA1SQ13698 OR6C71P-202ENST00000641886 1107 ntBASIC4.34□□□□□ -1.71
CACNA1SQ13698 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CACNA1SQ13698 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CACNA1SQ13698 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA1SQ13698 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA1SQ13698 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA1SQ13698 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA1SQ13698 SNORA68.2-201ENST00000391263 128 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 AF228730.2-201ENST00000438784 848 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 AC097262.1-201ENST00000452559 548 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 AC008481.1-201ENST00000463278 396 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 RPL21P13-201ENST00000488305 481 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 AL358913.1-201ENST00000554342 121 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 SETP1-201ENST00000556014 845 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 EIF1P6-201ENST00000600054 334 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 AC244517.3-201ENST00000616254 1235 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CACNA1SQ13698 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.33□□□□□ -1.72
CACNA1SQ13698 RNA5SP42-201ENST00000364278 115 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 AL160275.2-201ENST00000412010 394 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA1SQ13698 LIPT1P1-201ENST00000415870 1186 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 SAGE2P-201ENST00000420011 2126 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 S100A11P2-201ENST00000467589 312 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 RPL7P38-201ENST00000488396 739 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 AC092747.2-201ENST00000545069 983 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 AC105227.2-201ENST00000615075 605 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 AC233309.1-201ENST00000619522 751 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 AL645937.1-201ENST00000641739 1652 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA1SQ13698 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA1SQ13698 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 DDX6P1-205ENST00000441966 1436 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 U3.39-201ENST00000408569 239 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 RNA5SP296-201ENST00000410523 111 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 RPL5P16-201ENST00000471467 790 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 AC069306.1-201ENST00000507006 843 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 HNRNPKP5-201ENST00000515300 253 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 MIR486-1-201ENST00000612171 68 ntBASIC4.32□□□□□ -1.72
CACNA1SQ13698 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA1SQ13698 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA1SQ13698 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA1SQ13698 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.32□□□□□ -1.72
CACNA1SQ13698 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1SQ13698 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1SQ13698 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1SQ13698 SNORA38.1-201ENST00000364172 131 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 TRGV5P-201ENST00000419915 354 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 AJ239321.1-201ENST00000424255 564 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 AC135999.1-201ENST00000478962 479 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 NCAPGP2-201ENST00000557911 754 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 AL360157.1-201ENST00000565962 87 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 SCARNA15.3-201ENST00000626315 122 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 SCARNA4.1-201ENST00000628597 123 ntBASIC4.31□□□□□ -1.72
CACNA1SQ13698 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1SQ13698 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1SQ13698 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CACNA1SQ13698 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1SQ13698 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1SQ13698 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms