Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.11□□□□□ -2.07
HSPG2P98160 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 Y_RNA.466-201ENST00000384294 113 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 NPM1P11-201ENST00000417106 855 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC073069.1-201ENST00000428657 441 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AL356535.1-201ENST00000440335 398 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 AC005242.1-201ENST00000585658 438 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AL354760.1-201ENST00000608357 643 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 AC093156.1-201ENST00000440382 670 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 TPTE2P3-201ENST00000441562 1189 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.11□□□□□ -2.07
HSPG2P98160 H3F3AP1-201ENST00000559984 334 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.11□□□□□ -2.07
HSPG2P98160 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC105272.1-201ENST00000438604 198 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 VN1R40P-201ENST00000455196 941 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC128713.1-201ENST00000471495 306 ntBASIC2.11□□□□□ -2.07
HSPG2P98160 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.11□□□□□ -2.07
HSPG2P98160 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.11□□□□□ -2.07
HSPG2P98160 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
HSPG2P98160 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HSPG2P98160 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HSPG2P98160 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HSPG2P98160 HCFC2P1-201ENST00000392864 1592 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 RNA5SP52-201ENST00000362448 134 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 MIR887-201ENST00000401258 79 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 EEF1A1P41-201ENST00000414667 207 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 NUP35P1-201ENST00000422734 947 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 SETP9-201ENST00000423837 832 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 MAPRE1P3-201ENST00000435438 796 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 AC006480.1-201ENST00000449887 378 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.1□□□□□ -2.07
HSPG2P98160 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HSPG2P98160 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.1□□□□□ -2.07
HSPG2P98160 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.1□□□□□ -2.07
HSPG2P98160 AL360157.1-201ENST00000565962 87 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.1□□□□□ -2.07
HSPG2P98160 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.1□□□□□ -2.07
HSPG2P98160 AC015922.4-201ENST00000612568 690 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 Z83843.1-201ENST00000604070 3685 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HSPG2P98160 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HSPG2P98160 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HSPG2P98160 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.1□□□□□ -2.07
HSPG2P98160 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HSPG2P98160 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.1□□□□□ -2.07
HSPG2P98160 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HSPG2P98160 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.1□□□□□ -2.07
HSPG2P98160 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.1□□□□□ -2.07
HSPG2P98160 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.1□□□□□ -2.07
HSPG2P98160 SAGE2P-201ENST00000420011 2126 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 U3.12-201ENST00000364498 214 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 VDAC2P1-201ENST00000399358 958 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 AL035407.1-201ENST00000429211 571 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 RPS17P11-201ENST00000474297 293 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 RPS4XP13-201ENST00000483219 789 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC2.1□□□□□ -2.07
HSPG2P98160 AC138832.1-201ENST00000522871 556 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.1□□□□□ -2.07
HSPG2P98160 GTF3AP2-201ENST00000557014 266 ntBASIC2.1□□□□□ -2.07
HSPG2P98160 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.1□□□□□ -2.07
HSPG2P98160 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms