Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC144833.1-201ENST00000567953 4089 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 GDI2P1-201ENST00000429312 1336 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 RPL23P2-201ENST00000320371 421 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC005294.1-201ENST00000355509 281 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 RNA5SP234-201ENST00000363916 119 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 RNU1-77P-201ENST00000390868 162 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC016769.3-201ENST00000396562 315 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX6-1P78426 RNU2-21P-201ENST00000410368 188 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC109780.2-201ENST00000413467 845 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 METTL15P3-201ENST00000415522 1221 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AL031779.1-201ENST00000415663 330 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 SAGE2P-201ENST00000420011 2126 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 RPL30P3-201ENST00000424262 333 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AL136231.1-201ENST00000429407 730 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 VN1R54P-201ENST00000435210 1049 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 EPS15P1-201ENST00000448836 336 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 VDAC2P4-201ENST00000452925 711 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 RPL5P32-201ENST00000454085 879 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 RNU7-136P-201ENST00000458819 69 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 RPL35AP28-201ENST00000459730 331 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 RPS18P6-201ENST00000476880 458 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC106872.3-201ENST00000495104 446 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX6-1P78426 RNA5SP230-201ENST00000517039 122 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC022832.1-201ENST00000530718 645 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AL391156.1-201ENST00000554965 554 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AGGF1P4-201ENST00000568249 801 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 MIR4646-201ENST00000580775 63 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 BNIP3P23-201ENST00000599655 511 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC090181.2-201ENST00000602975 672 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC087763.1-201ENST00000603391 286 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC025574.2-201ENST00000615621 514 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AL121873.1-201ENST00000616013 524 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC005618.4-201ENST00000625053 554 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX6-1P78426 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX6-1P78426 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC007938.2-201ENST00000604666 2634 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NKX6-1P78426 AC083843.2-201ENST00000568248 6253 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 AC090971.4-201ENST00000560291 1800 ntBASIC4.83□□□□□ -1.64
NKX6-1P78426 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX6-1P78426 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX6-1P78426 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX6-1P78426 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NKX6-1P78426 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX6-1P78426 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX6-1P78426 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX6-1P78426 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX6-1P78426 AL592148.3-201ENST00000608771 2646 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
NKX6-1P78426 AL356473.1-201ENST00000406203 1408 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 MTND4P5-201ENST00000435821 1374 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 CASC19-221ENST00000641309 1382 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX6-1P78426 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX6-1P78426 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX6-1P78426 AC011155.1-201ENST00000316512 456 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 RPL23AP57-201ENST00000332361 466 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 FGF7P2-201ENST00000332473 296 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 RNU4-75P-201ENST00000364621 146 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NKX6-1P78426 RNU6-192P-201ENST00000391253 100 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 SNORA68.2-201ENST00000391263 128 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 BTBD10P2-201ENST00000404779 676 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 RNU6-648P-201ENST00000410190 107 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 AC007899.1-201ENST00000412776 775 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 RPS15AP40-201ENST00000419621 391 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 FABP7P2-201ENST00000429946 379 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX6-1P78426 PRELID3BP10-201ENST00000431957 584 ntBASIC4.82□□□□□ -1.64
NKX6-1P78426 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX6-1P78426 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.82□□□□□ -1.64
NKX6-1P78426 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX6-1P78426 AC092641.1-201ENST00000440229 772 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms