Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL672167.1-205ENST00000641112 3080 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.86□□□□□ -1.79
CX3CL1P78423 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 AC104118.1-201ENST00000607625 1589 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 MAPK10-263ENST00000641052 4307 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RNU6-984P-201ENST00000363236 109 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RNU6-1243P-201ENST00000364028 107 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RNU6-621P-201ENST00000364752 109 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 RNU6-657P-201ENST00000383904 107 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RNU6-157P-201ENST00000383957 107 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CX3CL1P78423 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AL645733.1-201ENST00000402250 217 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AC068533.2-201ENST00000411872 306 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RPL21P108-201ENST00000413857 481 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC004987.3-201ENST00000413879 771 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RPS15AP40-201ENST00000419621 391 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RPL7P53-201ENST00000421245 739 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 OR2AM1P-201ENST00000422137 422 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 NPM1P34-201ENST00000428821 893 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AL050321.1-201ENST00000432363 400 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RPL7P34-201ENST00000433316 712 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC093414.1-201ENST00000434712 514 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AL451139.1-201ENST00000434718 346 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 MTND3P1-201ENST00000441336 220 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 Z80107.2-201ENST00000445127 392 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 RPL12P26-201ENST00000452430 487 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 ANKRD26P4-201ENST00000455755 950 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RPL7AP28-201ENST00000464513 571 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RN7SL329P-201ENST00000467740 299 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC087385.1-201ENST00000475062 312 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AC005726.1-201ENST00000494679 427 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RN7SL558P-201ENST00000497468 299 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 SETP14-201ENST00000497538 873 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 SNX5P1-201ENST00000505757 1041 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 GAPDHP56-201ENST00000506031 988 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC104090.1-201ENST00000506341 1171 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 STMN1P2-201ENST00000508435 439 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 PGBD4P4-201ENST00000509673 613 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC010587.2-201ENST00000511727 448 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 BTF3P13-201ENST00000513224 490 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 NDUFB4P12-201ENST00000513465 390 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC016065.2-201ENST00000514530 444 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 SNORA3.4-201ENST00000515969 96 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RNA5SP392-201ENST00000516905 112 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 RNU6-709P-201ENST00000517257 104 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 OR5AZ1P-201ENST00000527448 943 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 GCSHP4-201ENST00000538792 439 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 GSTP1P1-201ENST00000548078 319 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 ZNF321P-202ENST00000550843 495 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AL049839.1-201ENST00000556151 657 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 DUXAP1-201ENST00000556632 463 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 RPL21P7-201ENST00000557463 483 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 AP005119.2-201ENST00000579735 1105 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 OR4K7P-201ENST00000580232 945 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC090312.1-201ENST00000580637 348 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AL357094.1-201ENST00000603845 844 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AL158042.1-201ENST00000605338 460 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AL121932.1-201ENST00000605542 214 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AL022401.1-201ENST00000619498 108 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 CR381572.2-201ENST00000624852 397 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 AC108751.5-201ENST00000492880 1336 ntBASIC3.85□□□□□ -1.79
CX3CL1P78423 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.85□□□□□ -1.79
CX3CL1P78423 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CL1P78423 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CL1P78423 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CL1P78423 AL359922.3-201ENST00000624779 1670 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms