Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 AC012435.1-202ENST00000568772 240 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.59□□□□□ -1.67
RAE1P78406 AC123786.2-201ENST00000603459 275 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC020910.3-201ENST00000603701 874 ntBASIC4.59□□□□□ -1.67
RAE1P78406 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RAE1P78406 AC069304.2-201ENST00000605154 435 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AL121932.1-201ENST00000605542 214 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AP001521.2-201ENST00000608772 546 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC090116.1-201ENST00000615679 446 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.59□□□□□ -1.67
RAE1P78406 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.59□□□□□ -1.67
RAE1P78406 AC092650.2-201ENST00000619984 902 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC022106.2-201ENST00000620114 757 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AP001005.3-201ENST00000622049 129 ntBASIC4.59□□□□□ -1.67
RAE1P78406 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.59□□□□□ -1.67
RAE1P78406 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.59□□□□□ -1.67
RAE1P78406 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
RAE1P78406 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RAE1P78406 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 TLK1P1-201ENST00000456760 2440 ntBASIC4.58□□□□□ -1.68
RAE1P78406 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 HSPA8P18-201ENST00000439846 1928 ntBASIC4.58□□□□□ -1.68
RAE1P78406 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RAE1P78406 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 AL445437.1-201ENST00000623157 3087 ntBASIC4.58□□□□□ -1.68
RAE1P78406 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 LINC00561-201ENST00000565815 2738 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC109780.1-201ENST00000451768 1344 ntBASIC4.58□□□□□ -1.68
RAE1P78406 RN7SKP104-201ENST00000362605 328 ntBASIC4.58□□□□□ -1.68
RAE1P78406 RNU6-251P-201ENST00000363235 104 ntBASIC4.58□□□□□ -1.68
RAE1P78406 RNU1-83P-201ENST00000363426 164 ntBASIC4.58□□□□□ -1.68
RAE1P78406 RNU6-444P-201ENST00000383988 108 ntBASIC4.58□□□□□ -1.68
RAE1P78406 RPL23AP29-201ENST00000397284 453 ntBASIC4.58□□□□□ -1.68
RAE1P78406 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 CYCSP45-201ENST00000402289 315 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AL589647.1-201ENST00000402485 466 ntBASIC4.58□□□□□ -1.68
RAE1P78406 MIR1178-201ENST00000408396 91 ntBASIC4.58□□□□□ -1.68
RAE1P78406 MIR1271-201ENST00000408537 86 ntBASIC4.58□□□□□ -1.68
RAE1P78406 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.58□□□□□ -1.68
RAE1P78406 DPPA2P3-201ENST00000411853 655 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 CHEK2P3-201ENST00000416118 248 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.58□□□□□ -1.68
RAE1P78406 AC008280.1-201ENST00000418851 412 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 RPL7P57-201ENST00000423238 740 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC009965.2-201ENST00000425328 970 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 AC010881.1-201ENST00000433830 235 ntBASIC4.58□□□□□ -1.68
RAE1P78406 B3GNT2P1-201ENST00000434960 952 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.58□□□□□ -1.68
RAE1P78406 MRPL48P1-201ENST00000445390 636 ntBASIC4.58□□□□□ -1.68
RAE1P78406 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.58□□□□□ -1.68
RAE1P78406 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 AL031584.1-201ENST00000447169 754 ntBASIC4.58□□□□□ -1.68
RAE1P78406 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 AC109486.1-201ENST00000486833 374 ntBASIC4.58□□□□□ -1.68
RAE1P78406 MTND4P2-201ENST00000507767 1203 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 MTND3P5-201ENST00000512798 333 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 RN7SKP96-201ENST00000516948 297 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.58□□□□□ -1.68
RAE1P78406 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.58□□□□□ -1.68
RAE1P78406 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 RNF138P2-201ENST00000603490 592 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC013562.2-201ENST00000611632 603 ntBASIC4.58□□□□□ -1.68
RAE1P78406 EIF3FP1-201ENST00000613970 806 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AP002799.1-201ENST00000623552 423 ntBASIC4.58□□□□□ -1.68
RAE1P78406 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RAE1P78406 CR381572.2-201ENST00000624852 397 ntBASIC4.58□□□□□ -1.68
RAE1P78406 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RAE1P78406 MUC2-202ENST00000613187 4845 ntBASIC4.58□□□□□ -1.68
RAE1P78406 AC010266.2-201ENST00000564741 3255 ntBASIC4.58□□□□□ -1.68
RAE1P78406 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RAE1P78406 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RAE1P78406 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAE1P78406 DDX43P2-201ENST00000604753 1354 ntBASIC4.57□□□□□ -1.68
RAE1P78406 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms