Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.26□□□□□ -1.89
UBA52P62987 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.26□□□□□ -1.89
UBA52P62987 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.26□□□□□ -1.89
UBA52P62987 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 MIR5684-201ENST00000585074 65 ntBASIC3.26□□□□□ -1.89
UBA52P62987 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.26□□□□□ -1.89
UBA52P62987 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.26□□□□□ -1.89
UBA52P62987 AL450489.1-201ENST00000612071 468 ntBASIC3.26□□□□□ -1.89
UBA52P62987 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.26□□□□□ -1.89
UBA52P62987 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.26□□□□□ -1.89
UBA52P62987 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.26□□□□□ -1.89
UBA52P62987 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBA52P62987 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBA52P62987 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
UBA52P62987 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UBA52P62987 ZNF542P-204ENST00000482727 1305 ntBASIC3.25□□□□□ -1.89
UBA52P62987 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UBA52P62987 AC107021.2-201ENST00000567714 2095 ntBASIC3.25□□□□□ -1.89
UBA52P62987 OR4A15-201ENST00000314706 1035 ntBASIC3.25□□□□□ -1.89
UBA52P62987 SNORD35B-201ENST00000363660 87 ntBASIC3.25□□□□□ -1.89
UBA52P62987 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UBA52P62987 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UBA52P62987 EI24P2-201ENST00000397776 1076 ntBASIC3.25□□□□□ -1.89
UBA52P62987 RAB9AP3-201ENST00000412737 573 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AIMP1P1-201ENST00000418670 937 ntBASIC3.25□□□□□ -1.89
UBA52P62987 OR5AW1P-201ENST00000426334 1006 ntBASIC3.25□□□□□ -1.89
UBA52P62987 ARF4P2-201ENST00000430209 526 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.25□□□□□ -1.89
UBA52P62987 RAB9AP1-201ENST00000449393 573 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AC243772.1-201ENST00000451620 410 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 OR9M1P-201ENST00000459641 921 ntBASIC3.25□□□□□ -1.89
UBA52P62987 METTL15P1-201ENST00000481421 1045 ntBASIC3.25□□□□□ -1.89
UBA52P62987 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.25□□□□□ -1.89
UBA52P62987 IGKV2-23-201ENST00000518729 323 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 MTND1P6-201ENST00000523621 946 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UBA52P62987 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 AC084757.4-201ENST00000616350 526 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.25□□□□□ -1.89
UBA52P62987 AC124312.6-202ENST00000623624 418 ntBASIC3.25□□□□□ -1.89
UBA52P62987 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.25□□□□□ -1.89
UBA52P62987 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.25□□□□□ -1.89
UBA52P62987 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.25□□□□□ -1.89
UBA52P62987 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UBA52P62987 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
UBA52P62987 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UBA52P62987 MTCO1P14-201ENST00000441695 1559 ntBASIC3.25□□□□□ -1.89
UBA52P62987 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.25□□□□□ -1.89
UBA52P62987 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.24□□□□□ -1.89
UBA52P62987 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.24□□□□□ -1.89
UBA52P62987 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.24□□□□□ -1.89
UBA52P62987 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBA52P62987 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UBA52P62987 RN7SKP156-201ENST00000410308 342 ntBASIC3.24□□□□□ -1.89
UBA52P62987 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.24□□□□□ -1.89
UBA52P62987 MOB1AP1-201ENST00000430903 535 ntBASIC3.24□□□□□ -1.89
UBA52P62987 HMGB1P37-201ENST00000439613 609 ntBASIC3.24□□□□□ -1.89
UBA52P62987 AL157884.3-201ENST00000448273 1184 ntBASIC3.24□□□□□ -1.89
UBA52P62987 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.24□□□□□ -1.89
UBA52P62987 AC022431.1-201ENST00000450941 438 ntBASIC3.24□□□□□ -1.89
UBA52P62987 PRSS3P4-201ENST00000453323 162 ntBASIC3.24□□□□□ -1.89
UBA52P62987 CYCSP20-201ENST00000473154 315 ntBASIC3.24□□□□□ -1.89
UBA52P62987 TRBV12-2-201ENST00000489763 344 ntBASIC3.24□□□□□ -1.89
UBA52P62987 RNA5SP309-201ENST00000516670 106 ntBASIC3.24□□□□□ -1.89
UBA52P62987 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.24□□□□□ -1.89
UBA52P62987 AC093331.1-201ENST00000521474 169 ntBASIC3.24□□□□□ -1.89
UBA52P62987 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UBA52P62987 AP000619.3-201ENST00000535634 1127 ntBASIC3.24□□□□□ -1.89
UBA52P62987 CYCSP30-201ENST00000546447 172 ntBASIC3.24□□□□□ -1.89
UBA52P62987 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.24□□□□□ -1.89
UBA52P62987 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.24□□□□□ -1.89
UBA52P62987 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.24□□□□□ -1.89
UBA52P62987 AC110743.1-201ENST00000584870 478 ntBASIC3.24□□□□□ -1.89
UBA52P62987 AC010680.3-201ENST00000604215 520 ntBASIC3.24□□□□□ -1.89
UBA52P62987 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.24□□□□□ -1.89
UBA52P62987 MIR6868-201ENST00000611215 58 ntBASIC3.24□□□□□ -1.89
UBA52P62987 AL713922.2-201ENST00000619384 716 ntBASIC3.24□□□□□ -1.89
UBA52P62987 AC012314.7-201ENST00000619693 93 ntBASIC3.24□□□□□ -1.89
UBA52P62987 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.24□□□□□ -1.89
UBA52P62987 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBA52P62987 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UBA52P62987 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UBA52P62987 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.24□□□□□ -1.89
UBA52P62987 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UBA52P62987 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UBA52P62987 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UBA52P62987 RNA5SP119-201ENST00000362715 117 ntBASIC3.23□□□□□ -1.89
UBA52P62987 RNU6-525P-201ENST00000363685 104 ntBASIC3.23□□□□□ -1.89
UBA52P62987 RNU6-283P-201ENST00000364788 107 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms