Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 OR4R3P-201ENST00000525084 838 ntBASIC2.32□□□□□ -2.04
RPL39P62891 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.32□□□□□ -2.04
RPL39P62891 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPL39P62891 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.32□□□□□ -2.04
RPL39P62891 CR383656.6-201ENST00000550518 394 ntBASIC2.32□□□□□ -2.04
RPL39P62891 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.32□□□□□ -2.04
RPL39P62891 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.32□□□□□ -2.04
RPL39P62891 AC006557.5-201ENST00000603126 811 ntBASIC2.32□□□□□ -2.04
RPL39P62891 AC010591.1-201ENST00000603941 649 ntBASIC2.32□□□□□ -2.04
RPL39P62891 AL049634.3-201ENST00000604968 457 ntBASIC2.32□□□□□ -2.04
RPL39P62891 AL591516.1-201ENST00000611326 274 ntBASIC2.32□□□□□ -2.04
RPL39P62891 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RPL39P62891 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.32□□□□□ -2.04
RPL39P62891 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.32□□□□□ -2.04
RPL39P62891 AC006042.3-201ENST00000454684 1469 ntBASIC2.32□□□□□ -2.04
RPL39P62891 CR383658.2-201ENST00000547576 1525 ntBASIC2.32□□□□□ -2.04
RPL39P62891 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RPL39P62891 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.32□□□□□ -2.04
RPL39P62891 AC093831.2-201ENST00000624393 3427 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AL049555.1-201ENST00000562834 1933 ntBASIC2.31□□□□□ -2.04
RPL39P62891 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPL39P62891 MIR323B-201ENST00000385269 82 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AC245054.2-201ENST00000415639 319 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.31□□□□□ -2.04
RPL39P62891 RPS29P7-201ENST00000439662 171 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AL357520.1-201ENST00000441557 453 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.31□□□□□ -2.04
RPL39P62891 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.31□□□□□ -2.04
RPL39P62891 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.31□□□□□ -2.04
RPL39P62891 PLGLA-201ENST00000465668 449 ntBASIC2.31□□□□□ -2.04
RPL39P62891 ST13P14-201ENST00000474095 734 ntBASIC2.31□□□□□ -2.04
RPL39P62891 RN7SL283P-201ENST00000489055 303 ntBASIC2.31□□□□□ -2.04
RPL39P62891 HMGN1P11-201ENST00000508668 303 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.31□□□□□ -2.04
RPL39P62891 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.31□□□□□ -2.04
RPL39P62891 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.31□□□□□ -2.04
RPL39P62891 TRAV37-201ENST00000553906 342 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.31□□□□□ -2.04
RPL39P62891 AC005476.1-201ENST00000554427 397 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.31□□□□□ -2.04
RPL39P62891 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.31□□□□□ -2.04
RPL39P62891 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.31□□□□□ -2.04
RPL39P62891 RN7SL703P-201ENST00000578485 302 ntBASIC2.31□□□□□ -2.04
RPL39P62891 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.31□□□□□ -2.04
RPL39P62891 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.31□□□□□ -2.04
RPL39P62891 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC2.31□□□□□ -2.04
RPL39P62891 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.31□□□□□ -2.04
RPL39P62891 uc_338.1-201ENST00000612113 180 ntBASIC2.31□□□□□ -2.04
RPL39P62891 MIR6730-201ENST00000622213 67 ntBASIC2.31□□□□□ -2.04
RPL39P62891 MIR7641-1-201ENST00000627518 61 ntBASIC2.31□□□□□ -2.04
RPL39P62891 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.31□□□□□ -2.04
RPL39P62891 DDX6P1-205ENST00000441966 1436 ntBASIC2.31□□□□□ -2.04
RPL39P62891 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPL39P62891 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPL39P62891 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPL39P62891 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC2.31□□□□□ -2.04
RPL39P62891 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPL39P62891 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPL39P62891 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
RPL39P62891 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPL39P62891 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.3□□□□□ -2.04
RPL39P62891 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
RPL39P62891 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
RPL39P62891 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPL39P62891 RNU1-70P-201ENST00000362618 164 ntBASIC2.3□□□□□ -2.04
RPL39P62891 RNA5SP119-201ENST00000362715 117 ntBASIC2.3□□□□□ -2.04
RPL39P62891 U8.11-201ENST00000384699 133 ntBASIC2.3□□□□□ -2.04
RPL39P62891 U8.12-201ENST00000384701 133 ntBASIC2.3□□□□□ -2.04
RPL39P62891 SNORA46-201ENST00000384762 135 ntBASIC2.3□□□□□ -2.04
RPL39P62891 MIR585-201ENST00000384887 94 ntBASIC2.3□□□□□ -2.04
RPL39P62891 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.3□□□□□ -2.04
RPL39P62891 PTP4A1P5-201ENST00000420305 455 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.3□□□□□ -2.04
RPL39P62891 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.3□□□□□ -2.04
RPL39P62891 AC009969.1-201ENST00000438726 172 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.3□□□□□ -2.04
RPL39P62891 HMGB3P6-201ENST00000444896 598 ntBASIC2.3□□□□□ -2.04
RPL39P62891 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.3□□□□□ -2.04
RPL39P62891 UQCRHP3-201ENST00000451503 251 ntBASIC2.3□□□□□ -2.04
RPL39P62891 U8.18-201ENST00000459285 133 ntBASIC2.3□□□□□ -2.04
RPL39P62891 RPL21P71-201ENST00000465598 459 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AC092185.1-201ENST00000491371 97 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.3□□□□□ -2.04
RPL39P62891 MTCO1P35-201ENST00000515270 228 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC2.3□□□□□ -2.04
RPL39P62891 TOMM20P2-201ENST00000540082 421 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.3□□□□□ -2.04
RPL39P62891 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.3□□□□□ -2.04
RPL39P62891 MIR4286-201ENST00000580651 93 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AC099676.1-201ENST00000608886 657 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AL356321.1-201ENST00000621360 228 ntBASIC2.3□□□□□ -2.04
RPL39P62891 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC2.3□□□□□ -2.04
RPL39P62891 AC127502.3-201ENST00000636170 1206 ntBASIC2.3□□□□□ -2.04
RPL39P62891 MIR6715B-201ENST00000637172 77 ntBASIC2.3□□□□□ -2.04
RPL39P62891 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPL39P62891 AC066616.2-201ENST00000559334 1481 ntBASIC2.3□□□□□ -2.04
RPL39P62891 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPL39P62891 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.3□□□□□ -2.04
RPL39P62891 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPL39P62891 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms