Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC090515.3-201ENST00000560431 315 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC023813.2-201ENST00000564321 469 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 AC009852.2-201ENST00000567898 485 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 IPO5P1-202ENST00000600039 287 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC018638.7-201ENST00000605836 1114 ntBASIC3.68□□□□□ -1.82
LMO4P61968 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 TUSC7.1-201ENST00000610969 165 ntBASIC3.68□□□□□ -1.82
LMO4P61968 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 AC068792.1-201ENST00000621354 417 ntBASIC3.68□□□□□ -1.82
LMO4P61968 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 MIR3653-201ENST00000625572 110 ntBASIC3.68□□□□□ -1.82
LMO4P61968 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LMO4P61968 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LMO4P61968 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.67□□□□□ -1.82
LMO4P61968 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.67□□□□□ -1.82
LMO4P61968 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 RNU4-44P-201ENST00000363050 141 ntBASIC3.67□□□□□ -1.82
LMO4P61968 RNU4-92P-201ENST00000363783 136 ntBASIC3.67□□□□□ -1.82
LMO4P61968 BMS1P3-201ENST00000372011 932 ntBASIC3.67□□□□□ -1.82
LMO4P61968 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LMO4P61968 SNORD116-9-201ENST00000384000 95 ntBASIC3.67□□□□□ -1.82
LMO4P61968 SNORD116-3-201ENST00000384287 95 ntBASIC3.67□□□□□ -1.82
LMO4P61968 SNORD116-7-201ENST00000384404 95 ntBASIC3.67□□□□□ -1.82
LMO4P61968 SNORD116-5-201ENST00000384462 95 ntBASIC3.67□□□□□ -1.82
LMO4P61968 SNORA70C-201ENST00000384538 135 ntBASIC3.67□□□□□ -1.82
LMO4P61968 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 RPL7P27-201ENST00000403775 720 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 MTND4P3-201ENST00000417829 541 ntBASIC3.67□□□□□ -1.82
LMO4P61968 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 RPS27AP12-201ENST00000429552 465 ntBASIC3.67□□□□□ -1.82
LMO4P61968 VDAC1P6-201ENST00000430062 855 ntBASIC3.67□□□□□ -1.82
LMO4P61968 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 AC005189.1-201ENST00000431286 310 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC005345.1-201ENST00000431868 217 ntBASIC3.67□□□□□ -1.82
LMO4P61968 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.67□□□□□ -1.82
LMO4P61968 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 EEF1A1P39-201ENST00000440791 250 ntBASIC3.67□□□□□ -1.82
LMO4P61968 TPTE2P6-202ENST00000445572 1007 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC068135.1-201ENST00000446164 246 ntBASIC3.67□□□□□ -1.82
LMO4P61968 EXTL2P1-201ENST00000446218 416 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 AC009963.2-201ENST00000453431 138 ntBASIC3.67□□□□□ -1.82
LMO4P61968 RPS6P2-201ENST00000454208 705 ntBASIC3.67□□□□□ -1.82
LMO4P61968 MTCO3P16-201ENST00000454456 754 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.67□□□□□ -1.82
LMO4P61968 USP9YP25-201ENST00000457708 443 ntBASIC3.67□□□□□ -1.82
LMO4P61968 UQCRHP4-201ENST00000471686 272 ntBASIC3.67□□□□□ -1.82
LMO4P61968 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMO4P61968 PARP4P3-201ENST00000510265 317 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 RNU6-1129P-201ENST00000515964 104 ntBASIC3.67□□□□□ -1.82
LMO4P61968 RNA5SP497-201ENST00000516081 97 ntBASIC3.67□□□□□ -1.82
LMO4P61968 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.67□□□□□ -1.82
LMO4P61968 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AP003730.1-201ENST00000524605 285 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 NDUFS5P6-201ENST00000529136 295 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.67□□□□□ -1.82
LMO4P61968 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.67□□□□□ -1.82
LMO4P61968 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.67□□□□□ -1.82
LMO4P61968 TRAV8-5-201ENST00000537369 341 ntBASIC3.67□□□□□ -1.82
LMO4P61968 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.67□□□□□ -1.82
LMO4P61968 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 AC025884.1-201ENST00000556034 378 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC007224.1-201ENST00000564410 144 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.67□□□□□ -1.82
LMO4P61968 MIR3160-1-201ENST00000577972 85 ntBASIC3.67□□□□□ -1.82
LMO4P61968 AC110743.1-201ENST00000584870 478 ntBASIC3.67□□□□□ -1.82
LMO4P61968 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.67□□□□□ -1.82
LMO4P61968 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.67□□□□□ -1.82
LMO4P61968 COX6CP4-201ENST00000605798 228 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms