Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CLDN6P56747 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.78□□□□□ -1.81
CLDN6P56747 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN6P56747 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN6P56747 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN6P56747 RNU6-31P-201ENST00000384388 108 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN6P56747 AP000907.1-201ENST00000428428 510 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN6P56747 CYCSP53-201ENST00000455540 265 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 BX510359.1-201ENST00000456973 237 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 AC021087.2-201ENST00000504656 1203 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN6P56747 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN6P56747 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN6P56747 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN6P56747 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN6P56747 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.77□□□□□ -1.81
CLDN6P56747 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.77□□□□□ -1.81
CLDN6P56747 AC091516.1-201ENST00000549191 703 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 EIF1AXP2-201ENST00000555940 413 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN6P56747 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.77□□□□□ -1.81
CLDN6P56747 VN1R84P-201ENST00000593697 235 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 VN1R92P-201ENST00000598511 928 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 BNIP3P11-201ENST00000603878 563 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 AC064801.1-201ENST00000612025 407 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 AC123768.4-201ENST00000616244 701 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN6P56747 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 AC119674.1-207ENST00000641355 633 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 AP002001.2-201ENST00000529025 1469 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN6P56747 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN6P56747 AL118496.1-201ENST00000440201 1812 ntBASIC3.77□□□□□ -1.81
CLDN6P56747 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLDN6P56747 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN6P56747 MTND4P26-201ENST00000415971 1359 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN6P56747 RNA5SP97-201ENST00000365006 84 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 U1.1-201ENST00000384101 164 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 RPL7P60-201ENST00000397636 735 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 SNORA3.3-201ENST00000408712 125 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 PGBD4P8-201ENST00000412993 562 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 AL391219.1-201ENST00000422570 483 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 RNF19BPX-201ENST00000426224 625 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 RWDD4P2-201ENST00000426392 563 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN6P56747 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN6P56747 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN6P56747 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN6P56747 AL627224.1-201ENST00000448334 444 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN6P56747 RPL36AP13-201ENST00000457490 317 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN6P56747 RWDD4P1-201ENST00000488019 565 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 PCNAP1-201ENST00000505363 709 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN6P56747 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 OR5M7P-201ENST00000526140 972 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN6P56747 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN6P56747 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.76□□□□□ -1.81
CLDN6P56747 MIR4458-201ENST00000578872 75 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN6P56747 OR1AB1P-201ENST00000585564 761 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.76□□□□□ -1.81
CLDN6P56747 AL049844.2-201ENST00000604280 628 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 ELOCP35-201ENST00000604289 336 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 AP004372.1-201ENST00000604842 844 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN6P56747 AC243654.2-201ENST00000612843 443 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 AC026368.1-201ENST00000614934 690 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 OR5AC4P-202ENST00000642086 985 ntBASIC3.76□□□□□ -1.81
CLDN6P56747 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN6P56747 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CLDN6P56747 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN6P56747 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CLDN6P56747 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLDN6P56747 MIR490-201ENST00000384865 128 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 HMGB3P19-201ENST00000403971 560 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN6P56747 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN6P56747 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN6P56747 AL591419.1-201ENST00000427423 339 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 NANOGP6-201ENST00000429190 847 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms