Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCS2P54868 SNORD9-201ENST00000362566 104 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 SNORA40.4-201ENST00000390971 128 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 CCNB2P1-201ENST00000399411 1150 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 UBE2V1P15-201ENST00000407776 448 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGCS2P54868 MTND4LP7-201ENST00000431728 294 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGCS2P54868 TMX2P1-201ENST00000436507 708 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGCS2P54868 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCS2P54868 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCS2P54868 EIF2S2P4-201ENST00000461070 984 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 RPS4XP10-201ENST00000465034 731 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCS2P54868 LARP7P4-201ENST00000481075 878 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AC020914.6-201ENST00000594327 272 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGCS2P54868 AC084373.1-201ENST00000603311 235 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 RPL21P136-201ENST00000605378 396 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.33□□□□□ -1.72
HMGCS2P54868 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGCS2P54868 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCS2P54868 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCS2P54868 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
HMGCS2P54868 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 AC007685.1-201ENST00000329806 452 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HMGCS2P54868 SNORD65-201ENST00000391079 73 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AC093719.1-202ENST00000392735 373 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCS2P54868 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCS2P54868 RPS7P15-201ENST00000415804 584 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 KCTD9P3-201ENST00000434597 1169 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCS2P54868 ARL5AP3-201ENST00000439327 386 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCS2P54868 CCRL1P1-201ENST00000449542 1053 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
HMGCS2P54868 CLIC4P1-201ENST00000453177 535 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 SNORD105B-201ENST00000458770 79 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 RNU6-467P-201ENST00000517027 110 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AC067904.2-201ENST00000517322 1283 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCS2P54868 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCS2P54868 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGCS2P54868 AL031985.2-201ENST00000600955 480 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AF131215.7-201ENST00000602443 707 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AL137849.1-201ENST00000604767 169 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AC034236.3-201ENST00000605999 461 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AC092574.1-201ENST00000609771 420 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AL133370.2-201ENST00000619934 439 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AP003400.6-201ENST00000624698 740 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 AP000720.1-201ENST00000625091 483 ntBASIC4.32□□□□□ -1.72
HMGCS2P54868 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCS2P54868 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCS2P54868 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCS2P54868 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HMGCS2P54868 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGCS2P54868 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGCS2P54868 RNU6-1251P-201ENST00000364502 107 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGCS2P54868 CYCSP4-201ENST00000429682 331 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC097713.2-201ENST00000430199 356 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AL353597.2-202ENST00000434901 373 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC093716.1-201ENST00000435923 377 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC092641.1-201ENST00000440229 772 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGCS2P54868 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS2P54868 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS2P54868 BX510359.1-201ENST00000456973 237 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AP000942.1-201ENST00000463969 747 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC084198.1-201ENST00000477747 402 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS2P54868 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGCS2P54868 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 OR7E13P-201ENST00000526052 910 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGCS2P54868 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGCS2P54868 AC093014.1-201ENST00000548926 724 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
HMGCS2P54868 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms