Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.63□□□□□ -1.51
EPHB3P54753 AL034370.1-201ENST00000397254 1590 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EPHB3P54753 AC090229.1-201ENST00000590983 1609 ntBASIC5.63□□□□□ -1.51
EPHB3P54753 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
EPHB3P54753 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC092681.1-201ENST00000297369 291 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 RNU5D-1-201ENST00000363299 116 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 Y_RNA.326-201ENST00000365176 113 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 Y_RNA.356-201ENST00000365475 113 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 RNU6-780P-201ENST00000391030 104 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AL589647.1-201ENST00000402485 466 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 MTCYBP36-201ENST00000404146 440 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AL356776.1-201ENST00000406574 447 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AC211486.3-201ENST00000412694 621 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AL354751.2-201ENST00000415471 210 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AC093162.1-201ENST00000419682 124 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.62□□□□□ -1.51
EPHB3P54753 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 HMGN1P13-201ENST00000505795 138 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.62□□□□□ -1.51
EPHB3P54753 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC009646.1-201ENST00000510455 318 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AP006245.2-201ENST00000522004 300 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC024940.3-201ENST00000538551 316 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC137768.1-201ENST00000549998 553 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.62□□□□□ -1.51
EPHB3P54753 SNORD39.2-201ENST00000579995 76 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 FAM106CP-201ENST00000582212 507 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 RN7SL356P-201ENST00000582228 248 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 AP000769.2-201ENST00000602344 396 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 YWHAQP7-201ENST00000603536 658 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AL139286.1-201ENST00000604465 483 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AC107214.2-201ENST00000608204 634 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AC103710.1-201ENST00000610003 901 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AL445264.1-201ENST00000621719 171 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 AC090574.1-201ENST00000623186 233 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 AC011447.7-201ENST00000624228 1590 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
EPHB3P54753 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 AL353796.1-201ENST00000561542 3241 ntBASIC5.62□□□□□ -1.51
EPHB3P54753 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
EPHB3P54753 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.62□□□□□ -1.51
EPHB3P54753 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EPHB3P54753 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
EPHB3P54753 Y_RNA.296-201ENST00000364930 108 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
EPHB3P54753 Y_RNA.529-201ENST00000384586 119 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 RNU6-1263P-201ENST00000384601 106 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 MIR525-201ENST00000384978 85 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
EPHB3P54753 AL133270.1-201ENST00000402635 279 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.61□□□□□ -1.51
EPHB3P54753 AC007390.1-201ENST00000415722 356 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.61□□□□□ -1.51
EPHB3P54753 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.61□□□□□ -1.51
EPHB3P54753 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.61□□□□□ -1.51
EPHB3P54753 AC005534.2-201ENST00000431047 433 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 PA2G4P6-201ENST00000438325 1197 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 RPS26P30-201ENST00000443431 335 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 HSPE1P22-201ENST00000456856 327 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC009127.1-201ENST00000467090 155 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms