Protein–RNA interactions for Protein: P53814

SMTN, Smoothelin, humanhuman

Predictions only

Length 917 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMTNP53814 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SMTNP53814 AC003973.3-201ENST00000624863 2822 ntBASIC6.71□□□□□ -1.34
SMTNP53814 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMTNP53814 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SMTNP53814 COX6B1P3-201ENST00000312310 260 ntBASIC6.71□□□□□ -1.34
SMTNP53814 RPL7P26-201ENST00000333817 754 ntBASIC6.71□□□□□ -1.34
SMTNP53814 Y_RNA.259-201ENST00000364619 101 ntBASIC6.71□□□□□ -1.34
SMTNP53814 SNORA20.2-201ENST00000383922 131 ntBASIC6.71□□□□□ -1.34
SMTNP53814 RNU6-952P-201ENST00000391164 108 ntBASIC6.71□□□□□ -1.34
SMTNP53814 BTBD10P2-201ENST00000404779 676 ntBASIC6.71□□□□□ -1.34
SMTNP53814 RNU2-6P-201ENST00000411404 190 ntBASIC6.71□□□□□ -1.34
SMTNP53814 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SMTNP53814 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.71□□□□□ -1.34
SMTNP53814 MTCYBP8-201ENST00000422855 651 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC018630.2-202ENST00000422992 927 ntBASIC6.71□□□□□ -1.34
SMTNP53814 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
SMTNP53814 AL353777.1-201ENST00000425552 326 ntBASIC6.71□□□□□ -1.34
SMTNP53814 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.71□□□□□ -1.34
SMTNP53814 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.71□□□□□ -1.34
SMTNP53814 AMYP1-201ENST00000440059 1023 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.71□□□□□ -1.34
SMTNP53814 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.71□□□□□ -1.34
SMTNP53814 GAPDHP14-201ENST00000450472 937 ntBASIC6.71□□□□□ -1.34
SMTNP53814 snoU13.29-201ENST00000459370 104 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC068228.1-201ENST00000461723 211 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC092865.4-201ENST00000477936 615 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.71□□□□□ -1.34
SMTNP53814 AC109481.1-201ENST00000509173 282 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.71□□□□□ -1.34
SMTNP53814 RN7SKP35-201ENST00000517210 151 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.71□□□□□ -1.34
SMTNP53814 AL389895.1-201ENST00000554127 252 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.71□□□□□ -1.34
SMTNP53814 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.71□□□□□ -1.34
SMTNP53814 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.71□□□□□ -1.34
SMTNP53814 HMGB1P6-201ENST00000569046 646 ntBASIC6.71□□□□□ -1.34
SMTNP53814 MIR4742-201ENST00000581069 85 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.71□□□□□ -1.34
SMTNP53814 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.71□□□□□ -1.34
SMTNP53814 RPL26P30-202ENST00000602923 645 ntBASIC6.71□□□□□ -1.34
SMTNP53814 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMTNP53814 AL078596.1-201ENST00000624856 447 ntBASIC6.71□□□□□ -1.34
SMTNP53814 AC073488.3-201ENST00000631611 778 ntBASIC6.71□□□□□ -1.34
SMTNP53814 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMTNP53814 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMTNP53814 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMTNP53814 AL355488.2-201ENST00000609909 2850 ntBASIC6.71□□□□□ -1.34
SMTNP53814 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
SMTNP53814 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.7□□□□□ -1.34
SMTNP53814 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SMTNP53814 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SMTNP53814 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
SMTNP53814 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
SMTNP53814 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SMTNP53814 AC005725.1-201ENST00000577346 2607 ntBASIC6.7□□□□□ -1.34
SMTNP53814 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.7□□□□□ -1.34
SMTNP53814 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SMTNP53814 AL137141.1-201ENST00000624622 4836 ntBASIC6.7□□□□□ -1.34
SMTNP53814 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SMTNP53814 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SMTNP53814 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SMTNP53814 SNORA33.2-201ENST00000365413 134 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.7□□□□□ -1.34
SMTNP53814 RNU6-730P-201ENST00000383954 104 ntBASIC6.7□□□□□ -1.34
SMTNP53814 RNU6-43P-201ENST00000384302 107 ntBASIC6.7□□□□□ -1.34
SMTNP53814 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.7□□□□□ -1.34
SMTNP53814 HMGB3P10-201ENST00000434734 572 ntBASIC6.7□□□□□ -1.34
SMTNP53814 GTF2IP13-201ENST00000438487 386 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 AC016027.4-201ENST00000450866 277 ntBASIC6.7□□□□□ -1.34
SMTNP53814 RPL37P3-201ENST00000456825 293 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 Y_RNA.631-201ENST00000459607 101 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AC023194.2-201ENST00000465398 406 ntBASIC6.7□□□□□ -1.34
SMTNP53814 RPS15AP17-201ENST00000470598 390 ntBASIC6.7□□□□□ -1.34
SMTNP53814 ST13P14-201ENST00000474095 734 ntBASIC6.7□□□□□ -1.34
SMTNP53814 RPL23AP40-201ENST00000487630 390 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AC090096.1-201ENST00000489168 390 ntBASIC6.7□□□□□ -1.34
SMTNP53814 RPL37P23-201ENST00000492641 294 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.7□□□□□ -1.34
SMTNP53814 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.7□□□□□ -1.34
SMTNP53814 SCOCP1-201ENST00000554676 349 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.7□□□□□ -1.34
SMTNP53814 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.7□□□□□ -1.34
SMTNP53814 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 AC008507.3-201ENST00000585753 472 ntBASIC6.7□□□□□ -1.34
SMTNP53814 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SMTNP53814 SNRPGP17-201ENST00000603780 214 ntBASIC6.7□□□□□ -1.34
SMTNP53814 AC010591.1-201ENST00000603941 649 ntBASIC6.7□□□□□ -1.34
SMTNP53814 Z84480.1-201ENST00000605131 311 ntBASIC6.7□□□□□ -1.34
SMTNP53814 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.7□□□□□ -1.34
SMTNP53814 AC025470.1-201ENST00000510053 2032 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms