Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 MIR2114-201ENST00000516645 80 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC087808.1-201ENST00000520501 361 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC012339.2-201ENST00000523996 453 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 AP001317.1-201ENST00000531194 960 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC100770.1-201ENST00000532310 322 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC092851.1-201ENST00000535964 478 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC079075.1-201ENST00000559543 878 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC109446.2-201ENST00000567872 497 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC135628.1-201ENST00000568867 534 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 MIR3614-201ENST00000581261 86 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA1P49639 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 BNIP3P26-201ENST00000600827 554 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 AP003973.1-201ENST00000604639 691 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC106791.2-201ENST00000604680 391 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AC121247.2-201ENST00000604776 136 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 AC090246.1-201ENST00000616499 426 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA1P49639 AL607023.1-201ENST00000620045 248 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA1P49639 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 MIR4302-201ENST00000638058 60 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 OR8B1P-202ENST00000641132 1178 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HOXA1P49639 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA1P49639 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA1P49639 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HOXA1P49639 MTND5P31-201ENST00000419366 1374 ntBASIC3.99□□□□□ -1.77
HOXA1P49639 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 AL049737.1-201ENST00000413920 1403 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC009643.2-201ENST00000603543 1448 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HOXA1P49639 ASNSP1-204ENST00000641977 1664 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC009313.2-201ENST00000417893 1941 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HOXA1P49639 RNU6-582P-201ENST00000362989 107 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 RNU5D-1-201ENST00000363299 116 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 RNU6-304P-201ENST00000364855 107 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL590084.2-201ENST00000401481 382 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 RPL23AP47-201ENST00000408017 460 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA1P49639 RNU6-272P-201ENST00000411028 104 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 RN7SKP126-201ENST00000411143 300 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC234781.2-201ENST00000426370 994 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA1P49639 BX323845.1-201ENST00000432417 179 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL353597.2-202ENST00000434901 373 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HOXA1P49639 GSTA7P-201ENST00000438425 448 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 USP9YP22-201ENST00000438971 294 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 AL450023.3-201ENST00000440592 271 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC092473.1-201ENST00000441098 221 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXA1P49639 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 SLC25A18P1-201ENST00000449385 454 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL645939.1-201ENST00000453429 797 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AL109741.2-201ENST00000455561 343 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC009127.1-201ENST00000467090 155 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 MTND3P7-201ENST00000474435 343 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 RPL23AP65-201ENST00000475608 468 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 OR2AO1P-201ENST00000476497 403 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 GAPDHP36-201ENST00000480688 918 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA1P49639 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 AC010587.2-201ENST00000511727 448 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA1P49639 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 IGKV2D-23-201ENST00000518179 286 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 AC008562.1-201ENST00000521763 330 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA1P49639 AC005832.3-201ENST00000537929 631 ntBASIC3.98□□□□□ -1.77
HOXA1P49639 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA1P49639 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms