Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL031736.2-201ENST00000426573 787 ntBASIC3.86□□□□□ -1.79
RORAP35398 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.86□□□□□ -1.79
RORAP35398 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.86□□□□□ -1.79
RORAP35398 RPS4XP4-201ENST00000443195 763 ntBASIC3.86□□□□□ -1.79
RORAP35398 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 SNX5P1-201ENST00000505757 1041 ntBASIC3.86□□□□□ -1.79
RORAP35398 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.86□□□□□ -1.79
RORAP35398 Vault.1-201ENST00000516474 102 ntBASIC3.86□□□□□ -1.79
RORAP35398 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
RORAP35398 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.86□□□□□ -1.79
RORAP35398 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.86□□□□□ -1.79
RORAP35398 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.86□□□□□ -1.79
RORAP35398 AL451086.1-201ENST00000605596 223 ntBASIC3.86□□□□□ -1.79
RORAP35398 AL031666.3-201ENST00000609320 1006 ntBASIC3.86□□□□□ -1.79
RORAP35398 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.86□□□□□ -1.79
RORAP35398 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.86□□□□□ -1.79
RORAP35398 MIR6500-201ENST00000622700 86 ntBASIC3.86□□□□□ -1.79
RORAP35398 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.86□□□□□ -1.79
RORAP35398 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.86□□□□□ -1.79
RORAP35398 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.86□□□□□ -1.79
RORAP35398 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RORAP35398 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.86□□□□□ -1.79
RORAP35398 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RORAP35398 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RORAP35398 MAPK10-373ENST00000641983 6772 ntBASIC3.85□□□□□ -1.79
RORAP35398 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.85□□□□□ -1.79
RORAP35398 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.85□□□□□ -1.79
RORAP35398 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RORAP35398 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.85□□□□□ -1.79
RORAP35398 RNU6-317P-201ENST00000384031 107 ntBASIC3.85□□□□□ -1.79
RORAP35398 PRELID3BP11-201ENST00000414230 479 ntBASIC3.85□□□□□ -1.79
RORAP35398 AC092647.1-201ENST00000420654 287 ntBASIC3.85□□□□□ -1.79
RORAP35398 AL691449.1-201ENST00000426570 421 ntBASIC3.85□□□□□ -1.79
RORAP35398 RPL7P2-201ENST00000427639 268 ntBASIC3.85□□□□□ -1.79
RORAP35398 RPS29P7-201ENST00000439662 171 ntBASIC3.85□□□□□ -1.79
RORAP35398 RRM2P4-201ENST00000441721 562 ntBASIC3.85□□□□□ -1.79
RORAP35398 MTND3P4-201ENST00000453537 303 ntBASIC3.85□□□□□ -1.79
RORAP35398 AC092691.2-201ENST00000461787 803 ntBASIC3.85□□□□□ -1.79
RORAP35398 RN7SL585P-201ENST00000470538 280 ntBASIC3.85□□□□□ -1.79
RORAP35398 AC091959.2-201ENST00000477363 321 ntBASIC3.85□□□□□ -1.79
RORAP35398 RPL21P129-201ENST00000491732 478 ntBASIC3.85□□□□□ -1.79
RORAP35398 HMGB1P3-201ENST00000502802 616 ntBASIC3.85□□□□□ -1.79
RORAP35398 AC017037.1-201ENST00000508460 471 ntBASIC3.85□□□□□ -1.79
RORAP35398 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.85□□□□□ -1.79
RORAP35398 KRT19P6-201ENST00000510983 209 ntBASIC3.85□□□□□ -1.79
RORAP35398 NPM1P41-201ENST00000512920 831 ntBASIC3.85□□□□□ -1.79
RORAP35398 IGKV2D-23-201ENST00000518179 286 ntBASIC3.85□□□□□ -1.79
RORAP35398 HMGB1P23-201ENST00000518743 568 ntBASIC3.85□□□□□ -1.79
RORAP35398 MTCO1P49-201ENST00000523429 802 ntBASIC3.85□□□□□ -1.79
RORAP35398 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.85□□□□□ -1.79
RORAP35398 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.85□□□□□ -1.79
RORAP35398 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.85□□□□□ -1.79
RORAP35398 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.85□□□□□ -1.79
RORAP35398 AL606490.9-201ENST00000603331 271 ntBASIC3.85□□□□□ -1.79
RORAP35398 LLPHP1-201ENST00000603571 367 ntBASIC3.85□□□□□ -1.79
RORAP35398 AC114878.2-201ENST00000604863 1251 ntBASIC3.85□□□□□ -1.79
RORAP35398 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.85□□□□□ -1.79
RORAP35398 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.85□□□□□ -1.79
RORAP35398 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.85□□□□□ -1.79
RORAP35398 AP001486.2-201ENST00000561652 5113 ntBASIC3.85□□□□□ -1.79
RORAP35398 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 EXOC5P1-201ENST00000510543 1969 ntBASIC3.85□□□□□ -1.79
RORAP35398 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.85□□□□□ -1.79
RORAP35398 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 AL353743.4-201ENST00000422653 1547 ntBASIC3.85□□□□□ -1.79
RORAP35398 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RORAP35398 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.84□□□□□ -1.79
RORAP35398 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RORAP35398 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.84□□□□□ -1.79
RORAP35398 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.79
RORAP35398 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.79
RORAP35398 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.84□□□□□ -1.79
RORAP35398 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
RORAP35398 FAM35DP-201ENST00000323387 2712 ntBASIC3.84□□□□□ -1.79
RORAP35398 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.84□□□□□ -1.79
RORAP35398 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RORAP35398 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RORAP35398 SNORA27.3-201ENST00000364937 134 ntBASIC3.84□□□□□ -1.79
RORAP35398 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.84□□□□□ -1.79
RORAP35398 SNORA48.7-201ENST00000391302 135 ntBASIC3.84□□□□□ -1.79
RORAP35398 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RORAP35398 MIR1183-201ENST00000408856 89 ntBASIC3.84□□□□□ -1.79
RORAP35398 RN7SKP202-201ENST00000410439 330 ntBASIC3.84□□□□□ -1.79
RORAP35398 RN7SKP159-201ENST00000410657 292 ntBASIC3.84□□□□□ -1.79
RORAP35398 CYCSP19-201ENST00000411715 316 ntBASIC3.84□□□□□ -1.79
RORAP35398 TCEA1P4-201ENST00000415066 844 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms