Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AP000926.4-201ENST00000527351 454 ntBASIC5.51□□□□□ -1.53
CLIP1P30622 DUXAP6-201ENST00000553858 601 ntBASIC5.51□□□□□ -1.53
CLIP1P30622 AC099489.2-201ENST00000574976 260 ntBASIC5.51□□□□□ -1.53
CLIP1P30622 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.51□□□□□ -1.53
CLIP1P30622 YPEL5P2-201ENST00000605553 359 ntBASIC5.51□□□□□ -1.53
CLIP1P30622 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLIP1P30622 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.51□□□□□ -1.53
CLIP1P30622 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.51□□□□□ -1.53
CLIP1P30622 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CLIP1P30622 CDY11P-201ENST00000447168 1651 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 RSL24D1P1-201ENST00000404972 493 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.5□□□□□ -1.53
CLIP1P30622 OR6C64P-201ENST00000419708 825 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 HSPE1P27-201ENST00000430808 296 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 MRPS18BP2-201ENST00000434310 759 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.5□□□□□ -1.53
CLIP1P30622 RPS29P31-201ENST00000446147 164 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 AC010285.3-201ENST00000511668 676 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 HIGD1AP18-201ENST00000520730 278 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 AC022882.1-201ENST00000532142 501 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.5□□□□□ -1.53
CLIP1P30622 HMGB1P50-201ENST00000605814 607 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.5□□□□□ -1.53
CLIP1P30622 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CLIP1P30622 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLIP1P30622 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLIP1P30622 AC068647.1-201ENST00000489539 2265 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 MTND4P26-201ENST00000415971 1359 ntBASIC5.5□□□□□ -1.53
CLIP1P30622 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLIP1P30622 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLIP1P30622 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLIP1P30622 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLIP1P30622 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLIP1P30622 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLIP1P30622 LAP3P1-201ENST00000403648 294 ntBASIC5.49□□□□□ -1.53
CLIP1P30622 BX323014.1-201ENST00000412876 237 ntBASIC5.49□□□□□ -1.53
CLIP1P30622 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.49□□□□□ -1.53
CLIP1P30622 AJ239321.1-201ENST00000424255 564 ntBASIC5.49□□□□□ -1.53
CLIP1P30622 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.49□□□□□ -1.53
CLIP1P30622 BTF3P5-201ENST00000457252 467 ntBASIC5.49□□□□□ -1.53
CLIP1P30622 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.49□□□□□ -1.53
CLIP1P30622 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.49□□□□□ -1.53
CLIP1P30622 MIR7112-201ENST00000616126 65 ntBASIC5.49□□□□□ -1.53
CLIP1P30622 AL359715.5-201ENST00000623431 443 ntBASIC5.49□□□□□ -1.53
CLIP1P30622 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CLIP1P30622 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLIP1P30622 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.49□□□□□ -1.53
CLIP1P30622 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLIP1P30622 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLIP1P30622 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 MIR128-1-201ENST00000384921 82 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 ZNF603P-201ENST00000405613 487 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 AC002075.2-201ENST00000425207 252 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP1P30622 AC099560.2-201ENST00000457554 255 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP1P30622 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.48□□□□□ -1.53
CLIP1P30622 AC020914.4-201ENST00000597690 277 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CLIP1P30622 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CLIP1P30622 FAM35DP-201ENST00000323387 2712 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP1P30622 AL035425.3-201ENST00000564206 4996 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLIP1P30622 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP1P30622 BX842559.1-201ENST00000419615 532 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLIP1P30622 AC010307.1-201ENST00000467206 836 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP1P30622 AL133383.2-201ENST00000622958 2336 ntBASIC5.48□□□□□ -1.53
CLIP1P30622 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP1P30622 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLIP1P30622 DDX6P1-205ENST00000441966 1436 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 SNORA38.1-201ENST00000364172 131 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP1P30622 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP1P30622 HMGB1P16-201ENST00000447155 540 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 RPL23AP73-201ENST00000492507 471 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.47□□□□□ -1.53
CLIP1P30622 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.47□□□□□ -1.53
CLIP1P30622 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP1P30622 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.47□□□□□ -1.53
CLIP1P30622 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP1P30622 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP1P30622 AC009303.3-201ENST00000591103 736 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 AC006946.3-201ENST00000609791 756 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.47□□□□□ -1.53
CLIP1P30622 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP1P30622 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP1P30622 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP1P30622 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLIP1P30622 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms