Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC090337.1-201ENST00000579651 2074 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC091152.2-201ENST00000591628 2569 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DMAP28067 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 RNU6-670P-201ENST00000364312 104 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 HNRNPDP2-201ENST00000406475 478 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 SPTLC1P2-201ENST00000407089 121 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 RNU6-55P-201ENST00000411092 107 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 RNU6-954P-201ENST00000411355 107 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC007563.3-201ENST00000433233 371 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 ARL5AP2-201ENST00000444698 533 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 MTND2P28-201ENST00000457540 1044 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 RNA5SP246-201ENST00000458909 119 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 RPS20P21-201ENST00000466859 343 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 ACTG1P13-201ENST00000486987 1043 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 TXNP6-201ENST00000510190 310 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC067904.2-201ENST00000517322 1283 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 OR8G5-201ENST00000524943 1041 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 OR6C73P-201ENST00000546432 358 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 RPL12P25-202ENST00000598100 674 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 AC011816.2-201ENST00000607089 556 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 AL512624.1-201ENST00000613638 469 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DMAP28067 AL139254.3-201ENST00000641097 674 ntBASIC3.34□□□□□ -1.87
HLA-DMAP28067 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DMAP28067 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DMAP28067 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DMAP28067 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 FAM91A3P-201ENST00000456826 2544 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 SNORA60-201ENST00000362396 134 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 MIR1178-201ENST00000408396 91 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC069218.2-201ENST00000411665 344 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC105402.1-201ENST00000413336 545 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPL31P2-201ENST00000413849 377 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPS7P13-201ENST00000413955 498 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC017079.2-201ENST00000416102 485 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 HIGD1AP4-201ENST00000430194 280 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 COX6B1P7-201ENST00000430845 235 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 Z85994.2-201ENST00000434327 452 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPS3AP54-201ENST00000435535 734 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 SETP5-201ENST00000437270 562 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AL138878.2-201ENST00000440581 1241 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC239367.2-201ENST00000447309 705 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 NPM1P49-201ENST00000448027 714 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPL12P26-201ENST00000452430 487 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 OR2AF1P-201ENST00000454899 889 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPL37P3-201ENST00000456825 293 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPS3AP50-201ENST00000487064 803 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 RPL23AP73-201ENST00000492507 471 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC090071.1-201ENST00000507713 644 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC110768.1-201ENST00000509222 400 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 RN7SKP289-201ENST00000517244 295 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 HIGD1AP10-201ENST00000527837 282 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 OR5AP1P-201ENST00000529730 940 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC068790.7-201ENST00000602347 528 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DMAP28067 AL161729.3-201ENST00000603533 673 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 AC090425.2-201ENST00000608818 501 ntBASIC3.33□□□□□ -1.88
HLA-DMAP28067 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DMAP28067 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DMAP28067 CIR1P2-201ENST00000514821 1342 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms