Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 RNA5SP156-201ENST00000410250 110 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AL035422.1-201ENST00000414193 397 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC113618.1-201ENST00000416747 285 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.21□□□□□ -1.42
NFKB1P19838 HSPE1P1-201ENST00000421494 318 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 RPL7AP14-201ENST00000424041 802 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC099782.1-201ENST00000425889 474 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC119618.1-201ENST00000434191 222 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.21□□□□□ -1.42
NFKB1P19838 AL731534.1-201ENST00000434711 269 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.21□□□□□ -1.42
NFKB1P19838 AC002381.1-201ENST00000447049 280 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 SLC25A18P1-201ENST00000449385 454 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.21□□□□□ -1.42
NFKB1P19838 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 APOOP2-201ENST00000461561 539 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 RPL32P9-201ENST00000487963 407 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC114728.1-201ENST00000488289 483 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC034222.1-201ENST00000494052 532 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.21□□□□□ -1.42
NFKB1P19838 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 HMGB3P15-201ENST00000507326 574 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 MTND4LP22-201ENST00000508209 276 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.21□□□□□ -1.42
NFKB1P19838 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.21□□□□□ -1.42
NFKB1P19838 AC105417.1-201ENST00000514691 285 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 RNU6-202P-201ENST00000515998 96 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 Y_RNA.720-201ENST00000517166 92 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC104986.1-201ENST00000517978 436 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC024405.1-201ENST00000532521 1042 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AL845552.1-201ENST00000556820 323 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.21□□□□□ -1.42
NFKB1P19838 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.21□□□□□ -1.42
NFKB1P19838 POLR3GP2-201ENST00000588366 668 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.21□□□□□ -1.42
NFKB1P19838 AP001330.4-201ENST00000604350 154 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 AC084781.2-201ENST00000615568 161 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 RFPL4AP6-201ENST00000616792 846 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 MTND4LP32-201ENST00000636111 270 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.21□□□□□ -1.42
NFKB1P19838 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.21□□□□□ -1.42
NFKB1P19838 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 ZNF652P1-201ENST00000442420 1309 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 DNM1P47-203ENST00000571780 12667 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
NFKB1P19838 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 MTCO1P12-201ENST00000414273 1543 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC114546.3-201ENST00000623582 1734 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.2□□□□□ -1.42
NFKB1P19838 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NFKB1P19838 RN7SKP44-201ENST00000363602 316 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 RNY1P12-201ENST00000364251 105 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 RNU6-831P-201ENST00000384548 107 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 MIR1-2-201ENST00000384961 85 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 Y_RNA.605-201ENST00000410577 105 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 CHEK2P3-201ENST00000416118 248 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 THEM7P-201ENST00000419556 672 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC007394.1-201ENST00000421941 531 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.2□□□□□ -1.42
NFKB1P19838 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.2□□□□□ -1.42
NFKB1P19838 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 NPM1P18-201ENST00000434232 732 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 GAPDHP59-201ENST00000435908 267 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.2□□□□□ -1.42
NFKB1P19838 ARL2BPP10-201ENST00000446487 531 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 RPL23AP60-201ENST00000450011 454 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 RN7SL352P-201ENST00000466002 277 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.2□□□□□ -1.42
NFKB1P19838 RN7SL836P-201ENST00000476140 296 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AC068587.1-201ENST00000483613 781 ntBASIC6.2□□□□□ -1.42
NFKB1P19838 AL163973.1-201ENST00000484753 577 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms