Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NCK1P16333 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.73□□□□□ -1.81
NCK1P16333 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.73□□□□□ -1.81
NCK1P16333 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NCK1P16333 AC026951.1-201ENST00000559530 2459 ntBASIC3.72□□□□□ -1.81
NCK1P16333 DCAF13P1-201ENST00000495256 1330 ntBASIC3.72□□□□□ -1.81
NCK1P16333 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
NCK1P16333 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCK1P16333 MTCO1P18-201ENST00000455518 1419 ntBASIC3.72□□□□□ -1.81
NCK1P16333 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.72□□□□□ -1.81
NCK1P16333 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCK1P16333 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCK1P16333 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NCK1P16333 AC103591.2-201ENST00000265259 766 ntBASIC3.72□□□□□ -1.81
NCK1P16333 RNU6-543P-201ENST00000362576 108 ntBASIC3.72□□□□□ -1.81
NCK1P16333 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NCK1P16333 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 HSPE1P8-201ENST00000406997 288 ntBASIC3.72□□□□□ -1.81
NCK1P16333 UBE2V1P15-201ENST00000407776 448 ntBASIC3.72□□□□□ -1.81
NCK1P16333 AC092745.2-202ENST00000411880 369 ntBASIC3.72□□□□□ -1.81
NCK1P16333 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 AC005189.1-201ENST00000431286 310 ntBASIC3.72□□□□□ -1.81
NCK1P16333 RPS26P40-201ENST00000435209 294 ntBASIC3.72□□□□□ -1.81
NCK1P16333 PPIAP17-201ENST00000438507 471 ntBASIC3.72□□□□□ -1.81
NCK1P16333 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NCK1P16333 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.72□□□□□ -1.81
NCK1P16333 RPL23AP24-201ENST00000458203 385 ntBASIC3.72□□□□□ -1.81
NCK1P16333 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.72□□□□□ -1.81
NCK1P16333 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.72□□□□□ -1.81
NCK1P16333 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 AC099522.1-202ENST00000514718 367 ntBASIC3.72□□□□□ -1.81
NCK1P16333 RN7SKP92-201ENST00000517266 244 ntBASIC3.72□□□□□ -1.81
NCK1P16333 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 AC007424.1-203ENST00000554613 687 ntBASIC3.72□□□□□ -1.81
NCK1P16333 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 AC079880.2-201ENST00000603790 1213 ntBASIC3.72□□□□□ -1.81
NCK1P16333 AC091905.1-201ENST00000624400 311 ntBASIC3.72□□□□□ -1.81
NCK1P16333 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.72□□□□□ -1.81
NCK1P16333 FAM157B-203ENST00000639350 358 ntBASIC3.72□□□□□ -1.81
NCK1P16333 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
NCK1P16333 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.72□□□□□ -1.81
NCK1P16333 AC008725.1-201ENST00000605123 2263 ntBASIC3.72□□□□□ -1.81
NCK1P16333 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NCK1P16333 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCK1P16333 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
NCK1P16333 CR381670.1-201ENST00000624291 1693 ntBASIC3.71□□□□□ -1.81
NCK1P16333 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
NCK1P16333 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
NCK1P16333 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NCK1P16333 RNA5SP505-201ENST00000364748 108 ntBASIC3.71□□□□□ -1.82
NCK1P16333 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NCK1P16333 MIR153-1-201ENST00000384914 90 ntBASIC3.71□□□□□ -1.82
NCK1P16333 MIR550A3-201ENST00000390735 95 ntBASIC3.71□□□□□ -1.82
NCK1P16333 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 AL035419.1-201ENST00000397037 564 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AL161909.1-201ENST00000397390 712 ntBASIC3.71□□□□□ -1.82
NCK1P16333 HMGB3P19-201ENST00000403971 560 ntBASIC3.71□□□□□ -1.82
NCK1P16333 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 RN7SKP177-201ENST00000410567 355 ntBASIC3.71□□□□□ -1.82
NCK1P16333 RPL7AP73-201ENST00000413490 353 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.71□□□□□ -1.82
NCK1P16333 AL139128.1-201ENST00000413921 941 ntBASIC3.71□□□□□ -1.82
NCK1P16333 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.71□□□□□ -1.82
NCK1P16333 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 OR5BE1P-201ENST00000425977 939 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC093422.3-201ENST00000428506 305 ntBASIC3.71□□□□□ -1.82
NCK1P16333 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.71□□□□□ -1.82
NCK1P16333 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 FABP5P3-201ENST00000437960 408 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 RANP8-201ENST00000444720 713 ntBASIC3.71□□□□□ -1.82
NCK1P16333 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 AL500527.1-201ENST00000448532 255 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AL513533.1-201ENST00000453728 415 ntBASIC3.71□□□□□ -1.82
NCK1P16333 RPL21P71-201ENST00000465598 459 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC010307.1-201ENST00000467206 836 ntBASIC3.71□□□□□ -1.82
NCK1P16333 TRBV12-2-201ENST00000489763 344 ntBASIC3.71□□□□□ -1.82
NCK1P16333 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 AK3P4-201ENST00000504283 583 ntBASIC3.71□□□□□ -1.82
NCK1P16333 SETP12-201ENST00000514068 805 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 RN7SKP96-201ENST00000516948 297 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms