Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP1P11387 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.5□□□□□ -1.69
TOP1P11387 ATP5HP2-201ENST00000433885 485 ntBASIC4.5□□□□□ -1.69
TOP1P11387 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP1P11387 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP1P11387 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP1P11387 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP1P11387 HIGD1AP18-201ENST00000520730 278 ntBASIC4.5□□□□□ -1.69
TOP1P11387 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP1P11387 AC092868.3-201ENST00000560515 784 ntBASIC4.5□□□□□ -1.69
TOP1P11387 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.5□□□□□ -1.69
TOP1P11387 NF1P5-201ENST00000588287 448 ntBASIC4.5□□□□□ -1.69
TOP1P11387 AC009303.3-201ENST00000591103 736 ntBASIC4.5□□□□□ -1.69
TOP1P11387 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP1P11387 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.5□□□□□ -1.69
TOP1P11387 ASNSP1-204ENST00000641977 1664 ntBASIC4.5□□□□□ -1.69
TOP1P11387 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.5□□□□□ -1.69
TOP1P11387 FAM35DP-201ENST00000323387 2712 ntBASIC4.5□□□□□ -1.69
TOP1P11387 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TOP1P11387 AP004289.2-201ENST00000444413 1457 ntBASIC4.49□□□□□ -1.69
TOP1P11387 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.49□□□□□ -1.69
TOP1P11387 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOP1P11387 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TOP1P11387 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TOP1P11387 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TOP1P11387 AL590704.1-201ENST00000402856 794 ntBASIC4.49□□□□□ -1.69
TOP1P11387 RNU6ATAC-201ENST00000408749 126 ntBASIC4.49□□□□□ -1.69
TOP1P11387 SNORA57.3-201ENST00000411095 141 ntBASIC4.49□□□□□ -1.69
TOP1P11387 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.49□□□□□ -1.69
TOP1P11387 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.49□□□□□ -1.69
TOP1P11387 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.49□□□□□ -1.69
TOP1P11387 RPS24P8-201ENST00000431490 402 ntBASIC4.49□□□□□ -1.69
TOP1P11387 NDUFA5P10-201ENST00000432147 357 ntBASIC4.49□□□□□ -1.69
TOP1P11387 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
TOP1P11387 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.49□□□□□ -1.69
TOP1P11387 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.49□□□□□ -1.69
TOP1P11387 NOTCH2P1-201ENST00000443481 624 ntBASIC4.49□□□□□ -1.69
TOP1P11387 NANOGP10-201ENST00000453325 895 ntBASIC4.49□□□□□ -1.69
TOP1P11387 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 AP000926.1-201ENST00000479573 241 ntBASIC4.49□□□□□ -1.69
TOP1P11387 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 ATG10-AS1-201ENST00000504846 648 ntBASIC4.49□□□□□ -1.69
TOP1P11387 AC147055.1-201ENST00000509261 750 ntBASIC4.49□□□□□ -1.69
TOP1P11387 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.49□□□□□ -1.69
TOP1P11387 RNA5SP164-201ENST00000516533 110 ntBASIC4.49□□□□□ -1.69
TOP1P11387 RNU6-1308P-201ENST00000516817 103 ntBASIC4.49□□□□□ -1.69
TOP1P11387 RNA5SP143-201ENST00000516936 115 ntBASIC4.49□□□□□ -1.69
TOP1P11387 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.49□□□□□ -1.69
TOP1P11387 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 MIR1254-2-201ENST00000579553 63 ntBASIC4.49□□□□□ -1.69
TOP1P11387 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.49□□□□□ -1.69
TOP1P11387 AC083899.3-201ENST00000603413 594 ntBASIC4.49□□□□□ -1.69
TOP1P11387 AC010680.4-201ENST00000605334 543 ntBASIC4.49□□□□□ -1.69
TOP1P11387 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP1P11387 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TOP1P11387 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOP1P11387 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOP1P11387 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.48□□□□□ -1.69
TOP1P11387 IPO8P1-201ENST00000455509 3109 ntBASIC4.48□□□□□ -1.69
TOP1P11387 UBE3AP2-201ENST00000429033 2259 ntBASIC4.48□□□□□ -1.69
TOP1P11387 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TOP1P11387 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TOP1P11387 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TOP1P11387 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TOP1P11387 RNU1-87P-201ENST00000363727 170 ntBASIC4.48□□□□□ -1.69
TOP1P11387 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.48□□□□□ -1.69
TOP1P11387 RN7SKP27-201ENST00000410684 333 ntBASIC4.48□□□□□ -1.69
TOP1P11387 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.48□□□□□ -1.69
TOP1P11387 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TOP1P11387 AL591419.1-201ENST00000427423 339 ntBASIC4.48□□□□□ -1.69
TOP1P11387 AC239367.2-201ENST00000447309 705 ntBASIC4.48□□□□□ -1.69
TOP1P11387 AL500522.2-201ENST00000448562 343 ntBASIC4.48□□□□□ -1.69
TOP1P11387 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.48□□□□□ -1.69
TOP1P11387 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.48□□□□□ -1.69
TOP1P11387 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.48□□□□□ -1.69
TOP1P11387 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.48□□□□□ -1.69
TOP1P11387 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.48□□□□□ -1.69
TOP1P11387 AC018797.3-201ENST00000513388 1241 ntBASIC4.48□□□□□ -1.69
TOP1P11387 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.48□□□□□ -1.69
TOP1P11387 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.48□□□□□ -1.69
TOP1P11387 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.48□□□□□ -1.69
TOP1P11387 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.48□□□□□ -1.69
TOP1P11387 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
TOP1P11387 AC067852.4-201ENST00000590314 478 ntBASIC4.48□□□□□ -1.69
TOP1P11387 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.48□□□□□ -1.69
TOP1P11387 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.48□□□□□ -1.69
TOP1P11387 AC055764.2-201ENST00000610089 670 ntBASIC4.48□□□□□ -1.69
TOP1P11387 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
TOP1P11387 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TOP1P11387 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TOP1P11387 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TOP1P11387 MAPK10-373ENST00000641983 6772 ntBASIC4.48□□□□□ -1.69
TOP1P11387 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TOP1P11387 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP1P11387 AL627171.1-201ENST00000618845 1308 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC138393.1-206ENST00000540997 1886 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms