Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CYCSP30-201ENST00000546447 172 ntBASIC3.09□□□□□ -1.91
CD28P10747 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.09□□□□□ -1.91
CD28P10747 MIR548Y-201ENST00000582739 110 ntBASIC3.09□□□□□ -1.91
CD28P10747 AL139395.1-201ENST00000603662 160 ntBASIC3.09□□□□□ -1.91
CD28P10747 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.09□□□□□ -1.91
CD28P10747 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.09□□□□□ -1.91
CD28P10747 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD28P10747 AC026368.1-201ENST00000614934 690 ntBASIC3.09□□□□□ -1.91
CD28P10747 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.09□□□□□ -1.91
CD28P10747 AP003072.4-201ENST00000624580 310 ntBASIC3.09□□□□□ -1.91
CD28P10747 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CD28P10747 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD28P10747 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD28P10747 AL353746.1-201ENST00000566293 6881 ntBASIC3.09□□□□□ -1.92
CD28P10747 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
CD28P10747 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CD28P10747 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CD28P10747 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.09□□□□□ -1.92
CD28P10747 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.08□□□□□ -1.92
CD28P10747 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 MAPK10-373ENST00000641983 6772 ntBASIC3.08□□□□□ -1.92
CD28P10747 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CD28P10747 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 SNORA71.3-201ENST00000362582 128 ntBASIC3.08□□□□□ -1.92
CD28P10747 RNA5SP399-201ENST00000364003 117 ntBASIC3.08□□□□□ -1.92
CD28P10747 HMGB3P19-201ENST00000403971 560 ntBASIC3.08□□□□□ -1.92
CD28P10747 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.08□□□□□ -1.92
CD28P10747 RAB9AP3-201ENST00000412737 573 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.08□□□□□ -1.92
CD28P10747 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 AC009965.2-201ENST00000425328 970 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC006946.1-201ENST00000429106 328 ntBASIC3.08□□□□□ -1.92
CD28P10747 HIGD1AP4-201ENST00000430194 280 ntBASIC3.08□□□□□ -1.92
CD28P10747 RPL37P1-201ENST00000432310 284 ntBASIC3.08□□□□□ -1.92
CD28P10747 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CD28P10747 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 MED6P1-201ENST00000439659 713 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.08□□□□□ -1.92
CD28P10747 RAB9AP1-201ENST00000449393 573 ntBASIC3.08□□□□□ -1.92
CD28P10747 MTND5P8-201ENST00000449817 1083 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC239809.1-201ENST00000450470 217 ntBASIC3.08□□□□□ -1.92
CD28P10747 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.08□□□□□ -1.92
CD28P10747 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.08□□□□□ -1.92
CD28P10747 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.08□□□□□ -1.92
CD28P10747 HMGB3P14-201ENST00000494195 599 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 AC135001.1-201ENST00000544546 283 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 AC079171.1-201ENST00000568788 914 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.08□□□□□ -1.92
CD28P10747 AC025946.2-201ENST00000603398 234 ntBASIC3.08□□□□□ -1.92
CD28P10747 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.08□□□□□ -1.92
CD28P10747 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.08□□□□□ -1.92
CD28P10747 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.08□□□□□ -1.92
CD28P10747 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.08□□□□□ -1.92
CD28P10747 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD28P10747 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.08□□□□□ -1.92
CD28P10747 AC105074.1-201ENST00000623380 3095 ntBASIC3.08□□□□□ -1.92
CD28P10747 RNF6P1-201ENST00000444889 1784 ntBASIC3.07□□□□□ -1.92
CD28P10747 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.07□□□□□ -1.92
CD28P10747 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CD28P10747 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.07□□□□□ -1.92
CD28P10747 SNORA73.2-201ENST00000364946 201 ntBASIC3.07□□□□□ -1.92
CD28P10747 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.07□□□□□ -1.92
CD28P10747 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CD28P10747 MTND2P15-201ENST00000418575 892 ntBASIC3.07□□□□□ -1.92
CD28P10747 AC073464.3-201ENST00000422564 712 ntBASIC3.07□□□□□ -1.92
CD28P10747 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.07□□□□□ -1.92
CD28P10747 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.07□□□□□ -1.92
CD28P10747 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.07□□□□□ -1.92
CD28P10747 CBX1P4-201ENST00000439415 457 ntBASIC3.07□□□□□ -1.92
CD28P10747 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CD28P10747 RPL34P26-201ENST00000445636 354 ntBASIC3.07□□□□□ -1.92
CD28P10747 FABP3P2-201ENST00000453169 399 ntBASIC3.07□□□□□ -1.92
CD28P10747 MTND3P4-201ENST00000453537 303 ntBASIC3.07□□□□□ -1.92
CD28P10747 AC139783.2-201ENST00000504847 1145 ntBASIC3.07□□□□□ -1.92
CD28P10747 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.07□□□□□ -1.92
CD28P10747 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.07□□□□□ -1.92
CD28P10747 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.07□□□□□ -1.92
CD28P10747 PAICSP4-201ENST00000517543 1253 ntBASIC3.07□□□□□ -1.92
CD28P10747 HMGB1P46-201ENST00000520062 610 ntBASIC3.07□□□□□ -1.92
CD28P10747 MTND1P6-201ENST00000523621 946 ntBASIC3.07□□□□□ -1.92
CD28P10747 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.07□□□□□ -1.92
CD28P10747 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CD28P10747 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.07□□□□□ -1.92
CD28P10747 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.07□□□□□ -1.92
CD28P10747 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms