Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RPS4XP6-201ENST00000477670 797 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXC6P09630 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXC6P09630 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 HSPE1P5-201ENST00000561489 272 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 AC005951.1-201ENST00000576706 485 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 AL358072.1-201ENST00000604156 575 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC6P09630 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXC6P09630 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HOXC6P09630 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC6P09630 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC6P09630 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC6P09630 OR11H4-201ENST00000315409 1082 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC6P09630 SNORD56.4-201ENST00000363883 71 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC6P09630 RNU6-31P-201ENST00000384388 108 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
HOXC6P09630 RNU2-17P-201ENST00000410290 190 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC6P09630 USP9YP21-201ENST00000420603 432 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 CYP4F29P-201ENST00000420685 446 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 PNRC2P1-201ENST00000423940 420 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 RPEP2-201ENST00000432149 701 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 RPL37P1-201ENST00000432310 284 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC6P09630 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXC6P09630 ZNF886P-201ENST00000450781 723 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC6P09630 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC6P09630 AC004263.1-201ENST00000479327 332 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC010486.2-201ENST00000505572 483 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXC6P09630 PGBD4P4-201ENST00000509673 613 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 RN7SKP34-201ENST00000516142 244 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC6P09630 AC090151.1-201ENST00000520784 730 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
HOXC6P09630 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC6P09630 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC6P09630 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC6P09630 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC6P09630 AL109741.3-201ENST00000561748 592 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 MIR4789-201ENST00000577469 82 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AL353778.1-201ENST00000603149 408 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC008739.3-201ENST00000603262 127 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC025588.2-201ENST00000604851 466 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AL160290.3-201ENST00000604869 165 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC6P09630 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC6P09630 AC006840.1-201ENST00000623069 542 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC139792.2-201ENST00000624218 587 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC079416.3-201ENST00000624479 549 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 AC012442.3-202ENST00000636742 206 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC6P09630 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC6P09630 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
HOXC6P09630 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXC6P09630 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC6P09630 CASC19-204ENST00000641001 2055 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC6P09630 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
HOXC6P09630 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXC6P09630 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC6P09630 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC6P09630 USP9YP4-201ENST00000424401 1745 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC6P09630 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC6P09630 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC6P09630 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC6P09630 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC6P09630 MIR208A-201ENST00000362287 71 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 OR13C3-201ENST00000374781 1108 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 MIR449B-201ENST00000384995 97 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 MCTS2P-201ENST00000394552 546 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AL049545.1-201ENST00000401856 572 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms