Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL049610.1-201ENST00000423374 372 ntBASIC4.14□□□□□ -1.75
TPM1P09493 MOB1AP1-201ENST00000430903 535 ntBASIC4.14□□□□□ -1.75
TPM1P09493 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 AL031663.1-201ENST00000437445 219 ntBASIC4.14□□□□□ -1.75
TPM1P09493 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM1P09493 AC010468.1-201ENST00000461022 817 ntBASIC4.14□□□□□ -1.75
TPM1P09493 RPL21P103-201ENST00000479921 488 ntBASIC4.14□□□□□ -1.75
TPM1P09493 AC106806.2-201ENST00000509365 500 ntBASIC4.14□□□□□ -1.75
TPM1P09493 PCBP2P3-201ENST00000509726 843 ntBASIC4.14□□□□□ -1.75
TPM1P09493 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM1P09493 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM1P09493 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 AC008489.1-201ENST00000524271 483 ntBASIC4.14□□□□□ -1.75
TPM1P09493 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM1P09493 YPEL5P3-201ENST00000547227 352 ntBASIC4.14□□□□□ -1.75
TPM1P09493 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.14□□□□□ -1.75
TPM1P09493 AL389895.1-201ENST00000554127 252 ntBASIC4.14□□□□□ -1.75
TPM1P09493 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM1P09493 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.14□□□□□ -1.75
TPM1P09493 AC092653.1-201ENST00000608509 531 ntBASIC4.14□□□□□ -1.75
TPM1P09493 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.14□□□□□ -1.75
TPM1P09493 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 AC138649.5-201ENST00000637456 137 ntBASIC4.14□□□□□ -1.75
TPM1P09493 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 CCT8P1-201ENST00000413611 1657 ntBASIC4.13□□□□□ -1.75
TPM1P09493 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TPM1P09493 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.13□□□□□ -1.75
TPM1P09493 AC016397.1-201ENST00000412463 242 ntBASIC4.13□□□□□ -1.75
TPM1P09493 MTND2P15-201ENST00000418575 892 ntBASIC4.13□□□□□ -1.75
TPM1P09493 TCEA1P2-201ENST00000420496 906 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM1P09493 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM1P09493 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM1P09493 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM1P09493 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.13□□□□□ -1.75
TPM1P09493 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.13□□□□□ -1.75
TPM1P09493 RPS23P7-201ENST00000466210 444 ntBASIC4.13□□□□□ -1.75
TPM1P09493 RPL23AP73-201ENST00000492507 471 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AP001086.1-201ENST00000494882 321 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 AC117525.1-201ENST00000515228 503 ntBASIC4.13□□□□□ -1.75
TPM1P09493 IGKV2D-10-201ENST00000520194 281 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AL121766.1-201ENST00000547436 487 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.13□□□□□ -1.75
TPM1P09493 AC006960.3-201ENST00000561845 705 ntBASIC4.13□□□□□ -1.75
TPM1P09493 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.13□□□□□ -1.75
TPM1P09493 AC234771.5-201ENST00000600161 514 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AC024940.4-201ENST00000605507 246 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AC105429.2-201ENST00000610567 517 ntBASIC4.13□□□□□ -1.75
TPM1P09493 MIR7973-1-201ENST00000614683 76 ntBASIC4.13□□□□□ -1.75
TPM1P09493 AC011472.4-201ENST00000615848 491 ntBASIC4.13□□□□□ -1.75
TPM1P09493 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TPM1P09493 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.13□□□□□ -1.75
TPM1P09493 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TPM1P09493 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TPM1P09493 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TPM1P09493 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM1P09493 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM1P09493 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM1P09493 RNU4-39P-201ENST00000362455 127 ntBASIC4.12□□□□□ -1.75
TPM1P09493 RNA5SP167-201ENST00000365461 116 ntBASIC4.12□□□□□ -1.75
TPM1P09493 RPS26P8-201ENST00000393490 348 ntBASIC4.12□□□□□ -1.75
TPM1P09493 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM1P09493 RPS27AP11-201ENST00000402798 447 ntBASIC4.12□□□□□ -1.75
TPM1P09493 RNU4-6P-201ENST00000410804 122 ntBASIC4.12□□□□□ -1.75
TPM1P09493 RBMY2KP-201ENST00000418221 992 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AIMP1P1-201ENST00000418670 937 ntBASIC4.12□□□□□ -1.75
TPM1P09493 RPS15AP6-201ENST00000420703 385 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AL031736.2-201ENST00000426573 787 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AC006989.1-201ENST00000427212 131 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AC068287.1-201ENST00000430283 295 ntBASIC4.12□□□□□ -1.75
TPM1P09493 USP9YP31-201ENST00000431405 881 ntBASIC4.12□□□□□ -1.75
TPM1P09493 RPS24P8-201ENST00000431490 402 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TPM1P09493 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.12□□□□□ -1.75
TPM1P09493 MTCYBP12-201ENST00000440559 1134 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.12□□□□□ -1.75
TPM1P09493 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM1P09493 MTND2P8-201ENST00000450555 1025 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.12□□□□□ -1.75
TPM1P09493 AC099563.1-201ENST00000456086 418 ntBASIC4.12□□□□□ -1.75
TPM1P09493 CEACAMP4-201ENST00000457676 421 ntBASIC4.12□□□□□ -1.75
TPM1P09493 HMGB3P30-201ENST00000457863 606 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AP000926.3-201ENST00000497201 299 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms