Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 RNU6-467P-201ENST00000517027 110 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.69□□□□□ -1.66
COL5A2P05997 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC010615.3-201ENST00000597319 394 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 KATNBL1P1-201ENST00000605192 748 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AC016542.1-201ENST00000608259 493 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AP003355.3-201ENST00000623465 114 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
COL5A2P05997 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 AL022311.1-201ENST00000623726 19416 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.69□□□□□ -1.66
COL5A2P05997 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL5A2P05997 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.69□□□□□ -1.66
COL5A2P05997 OR10J6P-201ENST00000289731 930 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 RN7SKP74-201ENST00000362849 309 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL5A2P05997 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.69□□□□□ -1.66
COL5A2P05997 TRBV12-2-201ENST00000489763 344 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 SUMO2P4-201ENST00000504193 276 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 SUMO2P20-201ENST00000520803 283 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC025857.1-201ENST00000525252 377 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COL5A2P05997 BNIP3P7-201ENST00000605641 516 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.69□□□□□ -1.66
COL5A2P05997 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.68□□□□□ -1.66
COL5A2P05997 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL5A2P05997 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL5A2P05997 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.68□□□□□ -1.66
COL5A2P05997 AC139713.2-215ENST00000641428 5037 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL5A2P05997 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL5A2P05997 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL5A2P05997 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL5A2P05997 AC106901.1-201ENST00000425086 698 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.68□□□□□ -1.66
COL5A2P05997 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.68□□□□□ -1.66
COL5A2P05997 AC098824.1-201ENST00000453565 980 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 AC099563.1-201ENST00000456086 418 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 AP001992.1-205ENST00000462248 379 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.68□□□□□ -1.66
COL5A2P05997 IGKV2-26-201ENST00000518305 343 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 IGHV3-32-201ENST00000519182 355 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.68□□□□□ -1.66
COL5A2P05997 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.68□□□□□ -1.66
COL5A2P05997 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.68□□□□□ -1.66
COL5A2P05997 CKS1BP3-201ENST00000600888 237 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 AC124312.4-201ENST00000605533 310 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 AL122125.1-201ENST00000616999 600 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.68□□□□□ -1.66
COL5A2P05997 AC009452.1-201ENST00000640823 606 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 AC073869.7-201ENST00000640874 297 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.68□□□□□ -1.66
COL5A2P05997 AC015813.6-201ENST00000624409 5808 ntBASIC4.68□□□□□ -1.66
COL5A2P05997 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A2P05997 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.67□□□□□ -1.66
COL5A2P05997 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A2P05997 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL5A2P05997 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A2P05997 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A2P05997 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A2P05997 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL5A2P05997 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
COL5A2P05997 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL5A2P05997 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.67□□□□□ -1.66
COL5A2P05997 HLFP1-201ENST00000402375 499 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 AL357075.1-201ENST00000404107 726 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 XKRYP6-201ENST00000440468 1116 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 XKRYP3-201ENST00000442113 1116 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 MTND6P5-201ENST00000448266 512 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.67□□□□□ -1.66
COL5A2P05997 AC006445.1-201ENST00000491925 405 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.67□□□□□ -1.66
COL5A2P05997 AC097462.2-201ENST00000504623 481 ntBASIC4.67□□□□□ -1.66
COL5A2P05997 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.67□□□□□ -1.66
COL5A2P05997 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms