Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC092013.1-201ENST00000438795 332 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC006326.1-201ENST00000445465 787 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 RPS29P31-201ENST00000446147 164 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 MTND5P8-201ENST00000449817 1083 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC026784.1-201ENST00000507986 352 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 OR4A12P-201ENST00000530847 918 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 CKS1BP1-201ENST00000555221 240 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 MIR548Y-201ENST00000582739 110 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL137849.1-201ENST00000604767 169 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC012467.1-201ENST00000607740 256 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AL592295.2-201ENST00000612578 206 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 AC025016.1-201ENST00000616746 682 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 CYP1D1P-201ENST00000416662 1433 ntBASIC3.42□□□□□ -1.86
HLA-DPB1P04440 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPB1P04440 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 CASC19-261ENST00000641853 1638 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 SPRR2C-201ENST00000290702 219 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 MIR372-201ENST00000362225 67 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 RNU6-452P-201ENST00000384406 107 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 RNU1-13P-201ENST00000384499 162 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AL353692.2-201ENST00000407054 335 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 RN7SKP285-201ENST00000410137 318 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AC013404.1-201ENST00000413068 249 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 MTND4P24-201ENST00000424002 397 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AL158073.1-201ENST00000426848 1104 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 HIGD1AP12-201ENST00000427832 281 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 RPS27AP12-201ENST00000429552 465 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 MOB1AP1-201ENST00000430903 535 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AC091390.1-201ENST00000433904 331 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 ZFAND6P1-201ENST00000434138 605 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 RPS20P1-201ENST00000434853 354 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 OR4C10P-201ENST00000434991 931 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AC084198.1-201ENST00000477747 402 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AL132838.2-201ENST00000492041 314 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AC092593.2-201ENST00000513866 913 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 RNU6-1231P-201ENST00000517185 103 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AL049870.4-201ENST00000555741 486 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 MIR4738-201ENST00000579134 87 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AC005242.1-201ENST00000585658 438 ntBASIC3.41□□□□□ -1.86
HLA-DPB1P04440 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPB1P04440 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
HLA-DPB1P04440 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DPB1P04440 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
HLA-DPB1P04440 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DPB1P04440 MAPK10-372ENST00000641954 3413 ntBASIC3.4□□□□□ -1.86
HLA-DPB1P04440 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.4□□□□□ -1.86
HLA-DPB1P04440 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 RNU6-883P-201ENST00000384597 107 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC073464.3-201ENST00000422564 712 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 NPM1P24-201ENST00000428039 894 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AL162151.2-201ENST00000448875 158 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 RPL21P11-201ENST00000461458 483 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC004801.2-202ENST00000463559 283 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 RPL23AP12-201ENST00000467573 473 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC110792.1-201ENST00000491826 472 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms