Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MRPS18BP2-201ENST00000434310 759 ntBASIC3.49□□□□□ -1.85
TNFP01375 RPSAP41-201ENST00000439695 860 ntBASIC3.49□□□□□ -1.85
TNFP01375 RPS15AP29-201ENST00000445539 400 ntBASIC3.49□□□□□ -1.85
TNFP01375 RBMY2UP-201ENST00000453474 324 ntBASIC3.49□□□□□ -1.85
TNFP01375 AC023598.1-201ENST00000472521 361 ntBASIC3.49□□□□□ -1.85
TNFP01375 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFP01375 AGGF1P3-201ENST00000493675 1213 ntBASIC3.49□□□□□ -1.85
TNFP01375 PRELID3BP7-201ENST00000503606 469 ntBASIC3.49□□□□□ -1.85
TNFP01375 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFP01375 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFP01375 AC007458.1-201ENST00000542812 373 ntBASIC3.49□□□□□ -1.85
TNFP01375 NCAPGP2-201ENST00000557911 754 ntBASIC3.49□□□□□ -1.85
TNFP01375 MIR5186-201ENST00000577504 120 ntBASIC3.49□□□□□ -1.85
TNFP01375 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFP01375 AC096577.2-201ENST00000611455 153 ntBASIC3.49□□□□□ -1.85
TNFP01375 AL158062.1-201ENST00000619632 745 ntBASIC3.49□□□□□ -1.85
TNFP01375 AC007342.8-201ENST00000623278 678 ntBASIC3.49□□□□□ -1.85
TNFP01375 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFP01375 AC132825.8-201ENST00000640783 297 ntBASIC3.49□□□□□ -1.85
TNFP01375 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 MTND5P1-201ENST00000445440 1375 ntBASIC3.49□□□□□ -1.85
TNFP01375 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFP01375 AL031985.3-201ENST00000565390 2449 ntBASIC3.49□□□□□ -1.85
TNFP01375 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 OR11H5P-202ENST00000641612 1325 ntBASIC3.48□□□□□ -1.85
TNFP01375 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.48□□□□□ -1.85
TNFP01375 RNU6-761P-201ENST00000384148 107 ntBASIC3.48□□□□□ -1.85
TNFP01375 RNVU1-14-201ENST00000384770 164 ntBASIC3.48□□□□□ -1.85
TNFP01375 MIR490-201ENST00000384865 128 ntBASIC3.48□□□□□ -1.85
TNFP01375 MIR3074-201ENST00000384885 81 ntBASIC3.48□□□□□ -1.85
TNFP01375 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFP01375 MTND2P11-201ENST00000423638 648 ntBASIC3.48□□□□□ -1.85
TNFP01375 USP12PY-201ENST00000427677 1064 ntBASIC3.48□□□□□ -1.85
TNFP01375 ATP5JP1-201ENST00000431631 322 ntBASIC3.48□□□□□ -1.85
TNFP01375 RPS6P12-201ENST00000432491 726 ntBASIC3.48□□□□□ -1.85
TNFP01375 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFP01375 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFP01375 AL133477.1-201ENST00000457472 514 ntBASIC3.48□□□□□ -1.85
TNFP01375 AC025518.1-201ENST00000479856 347 ntBASIC3.48□□□□□ -1.85
TNFP01375 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFP01375 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFP01375 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFP01375 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
TNFP01375 AC021733.2-201ENST00000518830 497 ntBASIC3.48□□□□□ -1.85
TNFP01375 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFP01375 AP000926.4-201ENST00000527351 454 ntBASIC3.48□□□□□ -1.85
TNFP01375 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.48□□□□□ -1.85
TNFP01375 KLKP1-201ENST00000595979 403 ntBASIC3.48□□□□□ -1.85
TNFP01375 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFP01375 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFP01375 AL359715.5-201ENST00000623431 443 ntBASIC3.48□□□□□ -1.85
TNFP01375 MAPK10-253ENST00000641010 4072 ntBASIC3.48□□□□□ -1.85
TNFP01375 AC134882.1-201ENST00000603738 1676 ntBASIC3.48□□□□□ -1.85
TNFP01375 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFP01375 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
TNFP01375 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFP01375 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
TNFP01375 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
TNFP01375 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TNFP01375 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFP01375 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TNFP01375 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TNFP01375 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFP01375 PTMAP5-201ENST00000393073 333 ntBASIC3.47□□□□□ -1.85
TNFP01375 SDCBPP2-201ENST00000424643 885 ntBASIC3.47□□□□□ -1.85
TNFP01375 HSPE1P27-201ENST00000430808 296 ntBASIC3.47□□□□□ -1.85
TNFP01375 RPL7P28-201ENST00000437739 740 ntBASIC3.47□□□□□ -1.85
TNFP01375 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFP01375 HMGB3P22-202ENST00000451823 572 ntBASIC3.47□□□□□ -1.85
TNFP01375 ANP32BP2-201ENST00000454525 545 ntBASIC3.47□□□□□ -1.85
TNFP01375 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFP01375 AC105918.1-201ENST00000474399 838 ntBASIC3.47□□□□□ -1.85
TNFP01375 AL358832.1-201ENST00000497800 389 ntBASIC3.47□□□□□ -1.85
TNFP01375 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFP01375 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.47□□□□□ -1.85
TNFP01375 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFP01375 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFP01375 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFP01375 AC135001.1-201ENST00000544546 283 ntBASIC3.47□□□□□ -1.85
TNFP01375 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFP01375 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TNFP01375 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFP01375 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TNFP01375 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TNFP01375 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TNFP01375 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TNFP01375 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TNFP01375 AC018555.1-201ENST00000567548 1980 ntBASIC3.47□□□□□ -1.85
TNFP01375 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms