Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFBP01127 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PDGFBP01127 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFBP01127 PNPT1P2-201ENST00000456768 2050 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AC139713.2-215ENST00000641428 5037 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AL672167.1-204ENST00000641875 3017 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFBP01127 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFBP01127 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
PDGFBP01127 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFBP01127 RNA5SP22-201ENST00000365393 109 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDGFBP01127 AL078604.1-201ENST00000404609 466 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 MIR1303-201ENST00000408625 86 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 SNORA57.3-201ENST00000411095 141 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 OR4K6P-201ENST00000416478 897 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 NPM1P34-201ENST00000428821 893 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 TBCAP1-201ENST00000436520 327 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 CYCSP32-201ENST00000440548 321 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 RPS7P5-201ENST00000441482 581 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 ABCF2P2-201ENST00000450549 296 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AL645939.1-201ENST00000453429 797 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 RPL23AP81-201ENST00000455252 467 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFBP01127 PRELID3BP7-201ENST00000503606 469 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AC008628.1-201ENST00000508663 265 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AC110792.2-201ENST00000510278 224 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFBP01127 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFBP01127 AC010306.1-201ENST00000523223 1117 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AP003049.1-201ENST00000529418 457 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 OR4R2P-201ENST00000530815 597 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.26□□□□□ -1.73
PDGFBP01127 AC074029.1-201ENST00000552531 1044 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.26□□□□□ -1.73
PDGFBP01127 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFBP01127 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFBP01127 AC022655.2-201ENST00000577280 318 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFBP01127 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.26□□□□□ -1.73
PDGFBP01127 AC233280.2-201ENST00000603917 1070 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AC069304.3-201ENST00000603938 1084 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PDGFBP01127 AL160290.3-201ENST00000604869 165 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AL592436.1-201ENST00000605135 558 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AC026979.4-201ENST00000606555 645 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFBP01127 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFBP01127 FP236240.3-201ENST00000623061 327 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
PDGFBP01127 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFBP01127 AL161912.2-201ENST00000565707 3007 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 AL512283.1-201ENST00000606756 1384 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
PDGFBP01127 AL022393.1-201ENST00000625142 1677 ntBASIC4.26□□□□□ -1.73
PDGFBP01127 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PDGFBP01127 OR10J6P-201ENST00000289731 930 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PDGFBP01127 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFBP01127 RNU1-63P-201ENST00000383902 164 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 AL359643.1-201ENST00000404109 423 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 MIR1271-201ENST00000408537 86 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 AC007738.1-201ENST00000413892 348 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 ELOCP6-201ENST00000429066 328 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 RPEP2-201ENST00000432149 701 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 ZNF33CP-201ENST00000432492 2030 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFBP01127 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFBP01127 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 PPIAP3-201ENST00000450588 505 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 ELOCP12-201ENST00000458706 328 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 OR9M1P-201ENST00000459641 921 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFBP01127 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.25□□□□□ -1.73
PDGFBP01127 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 AC093853.1-201ENST00000515689 483 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 RNU6-352P-201ENST00000516908 107 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFBP01127 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFBP01127 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFBP01127 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFBP01127 AC027807.1-201ENST00000559921 996 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 MIR5195-201ENST00000583555 115 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms