Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 Y_RNA.535-201ENST00000384612 99 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AC025750.1-201ENST00000399891 379 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AL391361.1-201ENST00000405580 489 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.18□□□□□ -1.58
CNOT4O95628 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.18□□□□□ -1.58
CNOT4O95628 TIMM9P3-201ENST00000428659 274 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 VDAC1P6-201ENST00000430062 855 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 ZYG11AP1-201ENST00000430329 837 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 AC073614.1-201ENST00000438690 650 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 HMGB3P21-201ENST00000452483 547 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 AC013828.1-201ENST00000481845 158 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 AC074255.1-201ENST00000511259 501 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 MTCO1P30-201ENST00000515244 580 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 SNORD116-26-201ENST00000516006 96 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 SNORA70.20-201ENST00000516848 126 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 RN7SKP96-201ENST00000516948 297 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.18□□□□□ -1.58
CNOT4O95628 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.18□□□□□ -1.58
CNOT4O95628 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.18□□□□□ -1.58
CNOT4O95628 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.18□□□□□ -1.58
CNOT4O95628 AC137800.2-201ENST00000574375 120 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 OR7E18P-201ENST00000592589 702 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.18□□□□□ -1.58
CNOT4O95628 AC010680.3-201ENST00000604215 520 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 FAM27E4-201ENST00000605259 342 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 AL590282.1-201ENST00000610379 1136 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 AC131238.1-201ENST00000617135 328 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AC108479.2-201ENST00000617314 601 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AP005431.1-201ENST00000618479 319 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 AC120349.2-201ENST00000625002 298 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 FER-210ENST00000628534 558 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 AC022164.1-201ENST00000568767 2673 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 GVINP1-202ENST00000531871 7271 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.17□□□□□ -1.58
CNOT4O95628 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CNOT4O95628 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
CNOT4O95628 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.17□□□□□ -1.58
CNOT4O95628 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.17□□□□□ -1.58
CNOT4O95628 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.17□□□□□ -1.58
CNOT4O95628 SUGT1P1-201ENST00000379514 476 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 Y_RNA.598-201ENST00000410480 95 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 HMGB1P11-201ENST00000413899 637 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.17□□□□□ -1.58
CNOT4O95628 AC062016.2-201ENST00000420950 676 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.17□□□□□ -1.58
CNOT4O95628 AL356583.2-201ENST00000426536 280 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AL136231.1-201ENST00000429407 730 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AC126120.1-201ENST00000431082 470 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CNOT4O95628 AC096775.1-201ENST00000437724 448 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AC023141.8-201ENST00000442554 208 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 RPS4XP4-201ENST00000443195 763 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.17□□□□□ -1.58
CNOT4O95628 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNOT4O95628 AC108463.1-201ENST00000450258 347 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.17□□□□□ -1.58
CNOT4O95628 snoU13.29-201ENST00000459370 104 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 FTH1P24-201ENST00000503502 462 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 NENFP3-201ENST00000503735 313 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AC019235.1-201ENST00000503847 207 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 NDUFB4P2-201ENST00000509515 391 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.17□□□□□ -1.58
CNOT4O95628 RNA5SP362-201ENST00000516048 118 ntBASIC5.17□□□□□ -1.58
CNOT4O95628 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.17□□□□□ -1.58
CNOT4O95628 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.17□□□□□ -1.58
CNOT4O95628 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.17□□□□□ -1.58
CNOT4O95628 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.17□□□□□ -1.58
CNOT4O95628 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms