Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX3O60493 AF279873.1-201ENST00000523393 313 ntBASIC4.09□□□□□ -1.75
SNX3O60493 OR5M2P-201ENST00000529003 936 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX3O60493 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX3O60493 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNX3O60493 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX3O60493 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX3O60493 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX3O60493 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX3O60493 OR1F2P-201ENST00000570470 933 ntBASIC4.09□□□□□ -1.75
SNX3O60493 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
SNX3O60493 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNX3O60493 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX3O60493 AL139286.1-201ENST00000604465 483 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AL365400.2-201ENST00000605604 902 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AC024060.1-201ENST00000607052 494 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AC090912.3-201ENST00000609775 533 ntBASIC4.09□□□□□ -1.75
SNX3O60493 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.09□□□□□ -1.75
SNX3O60493 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNX3O60493 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX3O60493 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SNX3O60493 AC106754.1-201ENST00000562632 1513 ntBASIC4.09□□□□□ -1.75
SNX3O60493 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SNX3O60493 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.09□□□□□ -1.76
SNX3O60493 AC093535.2-201ENST00000624769 2326 ntBASIC4.09□□□□□ -1.76
SNX3O60493 INTS6P1-201ENST00000504674 2530 ntBASIC4.09□□□□□ -1.76
SNX3O60493 AC008033.1-201ENST00000216407 1162 ntBASIC4.08□□□□□ -1.76
SNX3O60493 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNX3O60493 MIR16-1-201ENST00000385271 89 ntBASIC4.08□□□□□ -1.76
SNX3O60493 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNX3O60493 Y_RNA.578-201ENST00000390903 88 ntBASIC4.08□□□□□ -1.76
SNX3O60493 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX3O60493 PRRC2CP1-201ENST00000404428 159 ntBASIC4.08□□□□□ -1.76
SNX3O60493 OR51A3P-201ENST00000413596 924 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX3O60493 AC106883.1-201ENST00000418805 562 ntBASIC4.08□□□□□ -1.76
SNX3O60493 SFR1P2-201ENST00000421841 730 ntBASIC4.08□□□□□ -1.76
SNX3O60493 HSFY1P1-201ENST00000423928 1178 ntBASIC4.08□□□□□ -1.76
SNX3O60493 UBE3AP2-201ENST00000429033 2259 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX3O60493 GTF2IP3-201ENST00000433887 494 ntBASIC4.08□□□□□ -1.76
SNX3O60493 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.08□□□□□ -1.76
SNX3O60493 RAB11AP1-201ENST00000442978 646 ntBASIC4.08□□□□□ -1.76
SNX3O60493 HMGB1P48-201ENST00000446155 598 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AL500522.2-201ENST00000448562 343 ntBASIC4.08□□□□□ -1.76
SNX3O60493 RPL23AP15-201ENST00000450202 459 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX3O60493 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SNX3O60493 HMGB3P21-201ENST00000452483 547 ntBASIC4.08□□□□□ -1.76
SNX3O60493 RPL23AP81-201ENST00000455252 467 ntBASIC4.08□□□□□ -1.76
SNX3O60493 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX3O60493 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.08□□□□□ -1.76
SNX3O60493 GTF2IP9-201ENST00000502460 301 ntBASIC4.08□□□□□ -1.76
SNX3O60493 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX3O60493 PGBD4P4-201ENST00000509673 613 ntBASIC4.08□□□□□ -1.76
SNX3O60493 RPL7L1P4-201ENST00000513004 707 ntBASIC4.08□□□□□ -1.76
SNX3O60493 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.08□□□□□ -1.76
SNX3O60493 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX3O60493 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX3O60493 AC068446.3-201ENST00000555285 382 ntBASIC4.08□□□□□ -1.76
SNX3O60493 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX3O60493 AC084757.1-201ENST00000559987 490 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AC007225.2-201ENST00000562529 256 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 MIR4509-3-201ENST00000578671 94 ntBASIC4.08□□□□□ -1.76
SNX3O60493 BPTFP1-201ENST00000579209 492 ntBASIC4.08□□□□□ -1.76
SNX3O60493 RN7SL339P-201ENST00000580597 296 ntBASIC4.08□□□□□ -1.76
SNX3O60493 MIR3176-201ENST00000582210 90 ntBASIC4.08□□□□□ -1.76
SNX3O60493 MIR4512-201ENST00000583257 77 ntBASIC4.08□□□□□ -1.76
SNX3O60493 MIR4509-2-201ENST00000583920 94 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AC008687.2-201ENST00000597865 520 ntBASIC4.08□□□□□ -1.76
SNX3O60493 SGO1P1-201ENST00000603525 1447 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AP004247.3-201ENST00000608682 624 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AC027449.1-201ENST00000608890 407 ntBASIC4.08□□□□□ -1.76
SNX3O60493 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX3O60493 MIR6768-201ENST00000610734 72 ntBASIC4.08□□□□□ -1.76
SNX3O60493 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX3O60493 MIR4509-1-201ENST00000618224 94 ntBASIC4.08□□□□□ -1.76
SNX3O60493 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNX3O60493 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNX3O60493 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SNX3O60493 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX3O60493 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX3O60493 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX3O60493 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX3O60493 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX3O60493 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.07□□□□□ -1.76
SNX3O60493 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX3O60493 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX3O60493 MTND4P8-201ENST00000514997 1362 ntBASIC4.07□□□□□ -1.76
SNX3O60493 SNORA72.3-201ENST00000365074 132 ntBASIC4.07□□□□□ -1.76
SNX3O60493 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX3O60493 ATP5F1P4-201ENST00000397288 746 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms