Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPL30P2-201ENST00000414021 291 ntBASIC3.49□□□□□ -1.85
SGCEO43556 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.49□□□□□ -1.85
SGCEO43556 USP9YP31-201ENST00000431405 881 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AC087650.1-201ENST00000431445 468 ntBASIC3.49□□□□□ -1.85
SGCEO43556 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.49□□□□□ -1.85
SGCEO43556 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.49□□□□□ -1.85
SGCEO43556 MED6P1-201ENST00000439659 713 ntBASIC3.49□□□□□ -1.85
SGCEO43556 TXNP1-201ENST00000441872 371 ntBASIC3.49□□□□□ -1.85
SGCEO43556 MTCYBP21-201ENST00000443300 1113 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.49□□□□□ -1.85
SGCEO43556 AL162151.2-201ENST00000448875 158 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.49□□□□□ -1.85
SGCEO43556 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.49□□□□□ -1.85
SGCEO43556 AC009220.1-201ENST00000451614 275 ntBASIC3.49□□□□□ -1.85
SGCEO43556 RPS23P7-201ENST00000466210 444 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AL132838.2-201ENST00000492041 314 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.49□□□□□ -1.85
SGCEO43556 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.49□□□□□ -1.85
SGCEO43556 AC021087.2-201ENST00000504656 1203 ntBASIC3.49□□□□□ -1.85
SGCEO43556 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SGCEO43556 AC005798.1-201ENST00000513715 387 ntBASIC3.49□□□□□ -1.85
SGCEO43556 RN7SKP122-201ENST00000515923 296 ntBASIC3.49□□□□□ -1.85
SGCEO43556 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.49□□□□□ -1.85
SGCEO43556 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.49□□□□□ -1.85
SGCEO43556 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.49□□□□□ -1.85
SGCEO43556 PTP4A1P6-201ENST00000531034 478 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AC115085.1-201ENST00000588924 229 ntBASIC3.49□□□□□ -1.85
SGCEO43556 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.49□□□□□ -1.85
SGCEO43556 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.49□□□□□ -1.85
SGCEO43556 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
SGCEO43556 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.49□□□□□ -1.85
SGCEO43556 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
SGCEO43556 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.48□□□□□ -1.85
SGCEO43556 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SGCEO43556 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.48□□□□□ -1.85
SGCEO43556 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 SNORA62-201ENST00000365493 153 ntBASIC3.48□□□□□ -1.85
SGCEO43556 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SGCEO43556 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SGCEO43556 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SGCEO43556 AL049693.1-201ENST00000402760 611 ntBASIC3.48□□□□□ -1.85
SGCEO43556 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 AL691449.1-201ENST00000426570 421 ntBASIC3.48□□□□□ -1.85
SGCEO43556 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 C4BPAP2-201ENST00000428434 478 ntBASIC3.48□□□□□ -1.85
SGCEO43556 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 AC011742.1-201ENST00000431448 434 ntBASIC3.48□□□□□ -1.85
SGCEO43556 AL356276.2-201ENST00000435919 558 ntBASIC3.48□□□□□ -1.85
SGCEO43556 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.48□□□□□ -1.85
SGCEO43556 AC083863.1-201ENST00000438811 231 ntBASIC3.48□□□□□ -1.85
SGCEO43556 HMGB1P37-201ENST00000439613 609 ntBASIC3.48□□□□□ -1.85
SGCEO43556 H2AFZP6-201ENST00000444403 394 ntBASIC3.48□□□□□ -1.85
SGCEO43556 HMGB3P8-201ENST00000449709 577 ntBASIC3.48□□□□□ -1.85
SGCEO43556 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.48□□□□□ -1.85
SGCEO43556 PPIAP3-201ENST00000450588 505 ntBASIC3.48□□□□□ -1.85
SGCEO43556 TVP23BP2-201ENST00000455082 615 ntBASIC3.48□□□□□ -1.85
SGCEO43556 RPL23AP62-201ENST00000463396 453 ntBASIC3.48□□□□□ -1.85
SGCEO43556 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SGCEO43556 RPL7P19-201ENST00000469948 618 ntBASIC3.48□□□□□ -1.85
SGCEO43556 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.48□□□□□ -1.85
SGCEO43556 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.48□□□□□ -1.85
SGCEO43556 AP001086.1-201ENST00000494882 321 ntBASIC3.48□□□□□ -1.85
SGCEO43556 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.48□□□□□ -1.85
SGCEO43556 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.48□□□□□ -1.85
SGCEO43556 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.48□□□□□ -1.85
SGCEO43556 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.48□□□□□ -1.85
SGCEO43556 AC025884.1-201ENST00000556034 378 ntBASIC3.48□□□□□ -1.85
SGCEO43556 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.48□□□□□ -1.85
SGCEO43556 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.48□□□□□ -1.85
SGCEO43556 MTND4LP24-201ENST00000572277 291 ntBASIC3.48□□□□□ -1.85
SGCEO43556 RNA5SP108-201ENST00000605921 117 ntBASIC3.48□□□□□ -1.85
SGCEO43556 AP003392.5-201ENST00000607857 415 ntBASIC3.48□□□□□ -1.85
SGCEO43556 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.48□□□□□ -1.85
SGCEO43556 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.48□□□□□ -1.85
SGCEO43556 MIR492-201ENST00000638676 116 ntBASIC3.48□□□□□ -1.85
SGCEO43556 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SGCEO43556 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SGCEO43556 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SGCEO43556 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SGCEO43556 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SGCEO43556 IPO8P1-201ENST00000455509 3109 ntBASIC3.48□□□□□ -1.85
SGCEO43556 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.48□□□□□ -1.85
SGCEO43556 ZNF33CP-201ENST00000432492 2030 ntBASIC3.48□□□□□ -1.85
SGCEO43556 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.47□□□□□ -1.85
SGCEO43556 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.47□□□□□ -1.85
SGCEO43556 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SGCEO43556 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SGCEO43556 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.47□□□□□ -1.85
SGCEO43556 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SGCEO43556 AL121657.1-201ENST00000327215 531 ntBASIC3.47□□□□□ -1.85
SGCEO43556 RNA5SP399-201ENST00000364003 117 ntBASIC3.47□□□□□ -1.85
SGCEO43556 PTMAP5-201ENST00000393073 333 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms