Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC005832.2-201ENST00000538921 1430 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.93□□□□□ -1.62
PROM1O43490 MTND1P15-201ENST00000579262 949 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 AC090181.2-201ENST00000602975 672 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC090948.2-201ENST00000607363 564 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 AC068944.2-201ENST00000610373 403 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC005962.2-201ENST00000611427 652 ntBASIC4.93□□□□□ -1.62
PROM1O43490 AC025588.4-201ENST00000615802 908 ntBASIC4.93□□□□□ -1.62
PROM1O43490 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PROM1O43490 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 AC135068.12-201ENST00000637370 931 ntBASIC4.93□□□□□ -1.62
PROM1O43490 OR52B5P-202ENST00000641118 1110 ntBASIC4.93□□□□□ -1.62
PROM1O43490 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PROM1O43490 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PROM1O43490 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 AL731532.2-201ENST00000623542 1953 ntBASIC4.93□□□□□ -1.62
PROM1O43490 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PROM1O43490 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PROM1O43490 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.92□□□□□ -1.62
PROM1O43490 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 Y_RNA.6-201ENST00000362350 114 ntBASIC4.92□□□□□ -1.62
PROM1O43490 U3.2-201ENST00000362981 210 ntBASIC4.92□□□□□ -1.62
PROM1O43490 RNA5SP223-201ENST00000365174 120 ntBASIC4.92□□□□□ -1.62
PROM1O43490 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 MIR1182-201ENST00000408363 97 ntBASIC4.92□□□□□ -1.62
PROM1O43490 RPL12P9-201ENST00000412942 488 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 EI24P4-201ENST00000423683 1078 ntBASIC4.92□□□□□ -1.62
PROM1O43490 RPL31P54-201ENST00000429803 370 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 RPL35AP28-201ENST00000459730 331 ntBASIC4.92□□□□□ -1.62
PROM1O43490 RPL23AP12-201ENST00000467573 473 ntBASIC4.92□□□□□ -1.62
PROM1O43490 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
PROM1O43490 MTND4LP26-201ENST00000518144 282 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 OR5G4P-201ENST00000525251 760 ntBASIC4.92□□□□□ -1.62
PROM1O43490 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PROM1O43490 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.92□□□□□ -1.62
PROM1O43490 NPM1P47-201ENST00000560843 856 ntBASIC4.92□□□□□ -1.62
PROM1O43490 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 AL512347.1-201ENST00000566420 503 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.92□□□□□ -1.62
PROM1O43490 AC012414.6-201ENST00000568241 401 ntBASIC4.92□□□□□ -1.62
PROM1O43490 EIF1P4-201ENST00000572664 335 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC022884.2-201ENST00000578535 580 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC008507.1-201ENST00000587506 734 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 AC112220.3-201ENST00000605502 502 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC008498.1-201ENST00000613012 531 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC009509.4-201ENST00000619202 509 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AL356266.1-201ENST00000623311 483 ntBASIC4.92□□□□□ -1.62
PROM1O43490 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
PROM1O43490 LINC01739-205ENST00000641890 573 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC099063.3-201ENST00000642066 185 ntBASIC4.92□□□□□ -1.62
PROM1O43490 AC011493.1-201ENST00000596753 1632 ntBASIC4.92□□□□□ -1.62
PROM1O43490 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.92□□□□□ -1.62
PROM1O43490 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
PROM1O43490 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PROM1O43490 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms