Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 AL450326.2-201ENST00000421913 1962 ntBASIC4.96□□□□□ -1.62
PHGDHO43175 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.96□□□□□ -1.62
PHGDHO43175 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PHGDHO43175 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.95□□□□□ -1.62
PHGDHO43175 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PHGDHO43175 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PHGDHO43175 AC126323.6-202ENST00000568092 3511 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PHGDHO43175 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PHGDHO43175 RPL21P132-201ENST00000331267 462 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 SNORA17.1-201ENST00000362945 126 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 SNORA73.1-201ENST00000363107 205 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 RN7SKP160-201ENST00000363804 340 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PHGDHO43175 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PHGDHO43175 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.95□□□□□ -1.62
PHGDHO43175 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.95□□□□□ -1.62
PHGDHO43175 NPM1P4-201ENST00000414095 812 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 HSFY4P-201ENST00000415994 1181 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 LINC00993-201ENST00000420453 540 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 CHEK2P5-201ENST00000423877 246 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.95□□□□□ -1.62
PHGDHO43175 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.95□□□□□ -1.62
PHGDHO43175 OR52B5P-201ENST00000435337 951 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 RPL23AP16-201ENST00000441715 421 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.95□□□□□ -1.62
PHGDHO43175 AL137845.2-201ENST00000444292 988 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 IGHV5-78-201ENST00000450948 295 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AC092647.2-201ENST00000452998 253 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 TRGVB-201ENST00000453257 471 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 USP9YP10-201ENST00000454868 628 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 GYG1P1-201ENST00000460864 698 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 APOOP2-201ENST00000461561 539 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 MTND4LP3-201ENST00000468320 276 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 SETP11-201ENST00000473027 690 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 RPL7P39-201ENST00000481157 744 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AC079841.1-201ENST00000481228 950 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 AC080014.1-201ENST00000496877 1201 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.95□□□□□ -1.62
PHGDHO43175 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.95□□□□□ -1.62
PHGDHO43175 AC024558.1-201ENST00000505008 528 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.95□□□□□ -1.62
PHGDHO43175 USP9YP5-201ENST00000511770 630 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 ENPP7P9-201ENST00000514456 627 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 RNA5SP249-201ENST00000516127 99 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 DEFB131D-201ENST00000526803 184 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PHGDHO43175 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.95□□□□□ -1.62
PHGDHO43175 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.95□□□□□ -1.62
PHGDHO43175 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 OR11J2P-201ENST00000555298 907 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 CYCSP2-201ENST00000558168 301 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 ACTR3BP3-201ENST00000565577 979 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.95□□□□□ -1.62
PHGDHO43175 AC020914.6-201ENST00000594327 272 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AL031985.2-201ENST00000600955 480 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 MIR6768-201ENST00000610734 72 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AC011939.3-201ENST00000613686 466 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 AC092140.2-201ENST00000618027 521 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.95□□□□□ -1.62
PHGDHO43175 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 OR52B5P-202ENST00000641118 1110 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PHGDHO43175 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 MTND5P28-201ENST00000438005 1594 ntBASIC4.95□□□□□ -1.62
PHGDHO43175 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
PHGDHO43175 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PHGDHO43175 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PHGDHO43175 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
PHGDHO43175 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.94□□□□□ -1.62
PHGDHO43175 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PHGDHO43175 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 AL672167.1-205ENST00000641112 3080 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.94□□□□□ -1.62
PHGDHO43175 AL079343.1-201ENST00000572358 1771 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PHGDHO43175 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.94□□□□□ -1.62
PHGDHO43175 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 Y_RNA.77-201ENST00000362962 107 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 RN7SKP162-201ENST00000363605 345 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 RNU6-374P-201ENST00000364146 108 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 Y_RNA.302-201ENST00000364997 102 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 MT-TH-201ENST00000387441 69 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 RPS3AP26-201ENST00000398259 784 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AL023807.1-201ENST00000407932 359 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AL133384.1-201ENST00000412744 351 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms