Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC28A1O00337 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC28A1O00337 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
SLC28A1O00337 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC28A1O00337 AC016716.1-201ENST00000265882 708 ntBASIC4□□□□□ -1.77
SLC28A1O00337 RNU6-932P-201ENST00000391108 106 ntBASIC4□□□□□ -1.77
SLC28A1O00337 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC28A1O00337 HSPD1P16-201ENST00000402302 394 ntBASIC4□□□□□ -1.77
SLC28A1O00337 PGBD4P8-201ENST00000412993 562 ntBASIC4□□□□□ -1.77
SLC28A1O00337 NRBF2P2-201ENST00000413087 861 ntBASIC4□□□□□ -1.77
SLC28A1O00337 TRIM60P5Y-201ENST00000413946 574 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4□□□□□ -1.77
SLC28A1O00337 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4□□□□□ -1.77
SLC28A1O00337 FO393414.1-201ENST00000428697 1184 ntBASIC4□□□□□ -1.77
SLC28A1O00337 HMGB1P45-201ENST00000435986 653 ntBASIC4□□□□□ -1.77
SLC28A1O00337 TPTE2P3-201ENST00000441562 1189 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AC109327.1-201ENST00000471666 403 ntBASIC4□□□□□ -1.77
SLC28A1O00337 RPS17P11-201ENST00000474297 293 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AC015908.1-201ENST00000478739 476 ntBASIC4□□□□□ -1.77
SLC28A1O00337 RPS26P15-201ENST00000488067 348 ntBASIC4□□□□□ -1.77
SLC28A1O00337 RN7SL691P-201ENST00000494487 301 ntBASIC4□□□□□ -1.77
SLC28A1O00337 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4□□□□□ -1.77
SLC28A1O00337 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 MTCO3P27-201ENST00000514397 196 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 AP003355.1-201ENST00000518956 587 ntBASIC4□□□□□ -1.77
SLC28A1O00337 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4□□□□□ -1.77
SLC28A1O00337 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4□□□□□ -1.77
SLC28A1O00337 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4□□□□□ -1.77
SLC28A1O00337 IGJP1-201ENST00000522682 475 ntBASIC4□□□□□ -1.77
SLC28A1O00337 OR8G5-201ENST00000524943 1041 ntBASIC4□□□□□ -1.77
SLC28A1O00337 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4□□□□□ -1.77
SLC28A1O00337 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4□□□□□ -1.77
SLC28A1O00337 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4□□□□□ -1.77
SLC28A1O00337 AC007599.1-201ENST00000568688 1174 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AC008536.1-201ENST00000602872 669 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4□□□□□ -1.77
SLC28A1O00337 AC078899.5-201ENST00000612475 178 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AC008759.3-201ENST00000613300 508 ntBASIC4□□□□□ -1.77
SLC28A1O00337 MIR6730-201ENST00000622213 67 ntBASIC4□□□□□ -1.77
SLC28A1O00337 AC067852.7-201ENST00000623270 535 ntBASIC4□□□□□ -1.77
SLC28A1O00337 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4□□□□□ -1.77
SLC28A1O00337 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SLC28A1O00337 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 ZNF962P-201ENST00000443465 3140 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC28A1O00337 MARK2P15-201ENST00000432204 2186 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SLC28A1O00337 AC138393.1-206ENST00000540997 1886 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC28A1O00337 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SLC28A1O00337 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.99□□□□□ -1.77
SLC28A1O00337 OR4K17-201ENST00000315543 1032 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SLC28A1O00337 SNORA58B-201ENST00000364259 136 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC28A1O00337 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC28A1O00337 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC28A1O00337 AL450992.3-201ENST00000413192 568 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC28A1O00337 RPS12P23-201ENST00000419579 400 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 ELOCP6-201ENST00000429066 328 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 MTCO1P54-201ENST00000430139 712 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 RPS29P17-201ENST00000430795 166 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC28A1O00337 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC28A1O00337 NDUFS5P3-201ENST00000450668 321 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC28A1O00337 RPL23AP24-201ENST00000458203 385 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 ELOCP12-201ENST00000458706 328 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 RPL37P6-202ENST00000464216 403 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SLC28A1O00337 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC28A1O00337 AC146944.2-203ENST00000502493 354 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AC083829.1-201ENST00000503756 657 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AC139495.1-202ENST00000513164 354 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AF279873.1-201ENST00000523393 313 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.99□□□□□ -1.77
SLC28A1O00337 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.99□□□□□ -1.77
SLC28A1O00337 AC105233.3-201ENST00000531125 744 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 TRAV8-5-201ENST00000537369 341 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AC025946.2-201ENST00000603398 234 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AC024940.4-201ENST00000605507 246 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AC128687.2-201ENST00000609657 566 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.99□□□□□ -1.77
SLC28A1O00337 AL590396.4-201ENST00000636779 956 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 AL592494.2-201ENST00000425455 1548 ntBASIC3.99□□□□□ -1.77
SLC28A1O00337 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC28A1O00337 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SLC28A1O00337 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SLC28A1O00337 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms