Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AC025260.1-201ENST00000548858 430 ntBASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AC009101.1-201ENST00000568135 242 ntBASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AC022655.2-201ENST00000577280 318 ntBASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 CBX3P2-202ENST00000583365 535 ntBASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 NTAN1P1-201ENST00000603150 646 ntBASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 HMGB1P50-201ENST00000605814 607 ntBASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 AC114781.5-201ENST00000615297 108 ntBASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RHBDD3Q9Y3P4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC000367.1-201ENST00000452711 1766 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 LINC02471-203ENST00000641941 4752 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AL627171.1-201ENST00000618845 1308 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 RNA5SP366-201ENST00000365454 123 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 OR52E6-202ENST00000379946 954 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AL161909.1-201ENST00000397390 712 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AMD1P2-201ENST00000412936 992 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 PGBD4P8-201ENST00000412993 562 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AL592293.2-201ENST00000422292 996 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 CHIAP3-201ENST00000423668 1133 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 COX6B1P7-201ENST00000430845 235 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 TPTE2P1-204ENST00000435256 593 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AL162151.2-201ENST00000448875 158 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 RPL31P13-201ENST00000484151 370 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 USP9YP5-201ENST00000511770 630 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 OR5D17P-201ENST00000531492 978 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC009643.1-201ENST00000532030 391 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AGGF1P8-201ENST00000562979 1000 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 RPL23AP87-202ENST00000573039 466 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC090616.5-202ENST00000582111 297 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC114878.2-201ENST00000604863 1251 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC103710.3-201ENST00000608157 948 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AL359535.1-201ENST00000612100 1087 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 AC103858.2-201ENST00000621471 543 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDD3Q9Y3P4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC007342.9-201ENST00000623877 1385 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 BDP1P-201ENST00000582658 1990 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 RNU1-32P-201ENST00000363937 159 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 HMGB1P10-201ENST00000395823 563 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 RNU4-25P-201ENST00000410569 230 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 CKS1BP5-201ENST00000434172 273 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC006011.1-201ENST00000442758 349 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 AC097499.1-201ENST00000444277 208 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 BX276092.4-201ENST00000452056 248 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 SNRPGP3-201ENST00000469405 227 ntBASIC3.55□□□□□ -1.84
RHBDD3Q9Y3P4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms