Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC008489.1-201ENST00000524271 483 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 MIR4330-201ENST00000579077 105 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AP001180.3-201ENST00000582221 145 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 MIR548Y-201ENST00000582739 110 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC012531.5-201ENST00000611375 151 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 OR52H1-202ENST00000641796 1061 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 RLIMP1-201ENST00000339626 1680 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 RNU6-283P-201ENST00000364788 107 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC114814.2-201ENST00000419195 485 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC245028.1-201ENST00000423259 256 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 RNF19BPX-201ENST00000426224 625 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC073143.1-201ENST00000436316 395 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 MTND2P8-201ENST00000450555 1025 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 HMGN2P7-201ENST00000456186 273 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AL136097.1-201ENST00000456945 913 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 CEACAMP4-201ENST00000457676 421 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC138393.1-206ENST00000540997 1886 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC115085.1-201ENST00000588924 229 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 KLKP1-201ENST00000595979 403 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AP004372.1-201ENST00000604842 844 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 AC004943.3-201ENST00000624116 600 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VAPAQ9P0L0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.57□□□□□ -1.84
VAPAQ9P0L0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 DCAF13P3-201ENST00000561147 1334 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 RPL30P2-201ENST00000414021 291 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AL356095.1-201ENST00000417217 199 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AL353093.1-201ENST00000441292 436 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 RPS29P31-201ENST00000446147 164 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 HMGB1P26-201ENST00000452520 628 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 RPS4XP15-201ENST00000489210 795 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AC110792.1-201ENST00000491826 472 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 CYP2C60P-201ENST00000566088 139 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 SNORA62.6-201ENST00000606322 83 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 RNU4-89P-201ENST00000607443 133 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 MIR7973-1-201ENST00000614683 76 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AC090506.2-201ENST00000624521 419 ntBASIC3.56□□□□□ -1.84
VAPAQ9P0L0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VAPAQ9P0L0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 MIR421-201ENST00000365696 85 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 RNU6-185P-201ENST00000384421 107 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms