Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FO082796.1-201ENST00000523795 183 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 MIR544B-201ENST00000582372 78 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AC011373.1-201ENST00000607270 237 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AL732618.1-201ENST00000623251 301 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AP006248.2-201ENST00000623309 592 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AC021106.3-201ENST00000623925 531 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 PARP4P2-201ENST00000446672 3326 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AC108467.2-201ENST00000617640 1597 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 AC087516.1-201ENST00000561236 2428 ntBASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UBE2OQ9C0C9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 Y_RNA.25-201ENST00000362528 102 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 RNU6-282P-201ENST00000365357 103 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 RNU6-463P-201ENST00000384340 107 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 HMGA1P8-201ENST00000414130 321 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 CEACAMP7-201ENST00000444105 496 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 RPS23P9-201ENST00000448848 438 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 HIGD1AP8-201ENST00000453927 274 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 RPS23P6-201ENST00000466136 431 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 RPL7P19-201ENST00000469948 618 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC100832.1-201ENST00000471945 383 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 SNRPCP3-201ENST00000474888 476 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 RPS4XP1-201ENST00000482189 787 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC083795.1-201ENST00000491760 320 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC112204.1-201ENST00000502591 103 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC111193.1-201ENST00000504097 155 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 POU5F1P7-201ENST00000508759 541 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC093809.1-201ENST00000509155 340 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 RNU7-30P-201ENST00000516835 62 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 HMGB1P23-201ENST00000518743 568 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 NMNAT1P1-201ENST00000554095 876 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC093249.1-201ENST00000567049 203 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC055876.1-202ENST00000567053 138 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC006116.10-201ENST00000591836 581 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC113139.1-201ENST00000605049 239 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 MIR8080-201ENST00000622224 89 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC138649.5-201ENST00000637456 137 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AC119674.1-212ENST00000641155 993 ntBASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UBE2OQ9C0C9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 MTND5P16-201ENST00000460269 1703 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 RLIMP2-201ENST00000427891 1563 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 GNG5P1-201ENST00000255500 204 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 SNORA43.1-201ENST00000364863 140 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 SNORA70H-201ENST00000383910 135 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 Y_RNA.422-201ENST00000384054 114 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 SNORA70J-201ENST00000384182 135 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 MIR141-201ENST00000384975 95 ntBASIC6.54□□□□□ -1.36
UBE2OQ9C0C9 TMSB4XP8-201ENST00000402089 135 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms