Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 HSPA8P17-201ENST00000427029 1382 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 RNU6-386P-201ENST00000362650 107 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AL390879.2-203ENST00000426943 1121 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 HMGN2P31-201ENST00000432430 273 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 C1DP3-201ENST00000455013 423 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 GMCL1P2-201ENST00000605230 823 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AC079684.1-201ENST00000621405 437 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 AC007342.8-201ENST00000623278 678 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 ATE1-AS1-202ENST00000636460 506 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 MIR183-201ENST00000384958 110 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 MTND2P15-201ENST00000418575 892 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AL139247.1-201ENST00000422768 325 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AP000907.1-201ENST00000428428 510 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 UBDP1-202ENST00000457888 382 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AL133457.1-201ENST00000564251 987 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC007620.3-201ENST00000608131 497 ntBASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPAP1Q9BWH6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 RNU6-891P-201ENST00000384280 111 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 MIR491-201ENST00000384877 84 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 RPL21P109-201ENST00000422213 475 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AC093084.1-201ENST00000424233 687 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 RAC1P2-201ENST00000511164 579 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 HMGN1P15-201ENST00000513870 295 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 RNA5SP208-201ENST00000516156 78 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 MIR2114-201ENST00000516645 80 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 RNU1-30P-201ENST00000606575 163 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AL357559.1-201ENST00000622228 274 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 U6.105-201ENST00000637379 88 ntBASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RPAP1Q9BWH6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.59□□□□□ -1.68
RPAP1Q9BWH6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.59□□□□□ -1.68
RPAP1Q9BWH6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 AC032011.1-201ENST00000611703 1549 ntBASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 MIR34B-201ENST00000385076 84 ntBASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 PTMAP5-201ENST00000393073 333 ntBASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 ATP5A1P2-201ENST00000412323 255 ntBASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 MTND4LP13-201ENST00000425022 298 ntBASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 OR5AW1P-201ENST00000426334 1006 ntBASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 AC092809.1-201ENST00000441469 474 ntBASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.58□□□□□ -1.68
RPAP1Q9BWH6 AC106872.2-201ENST00000494303 480 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms