Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PPIL1P1-201ENST00000423936 499 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 RPL12P34-201ENST00000424532 479 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AL138479.1-201ENST00000426913 484 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC093106.2-201ENST00000428212 385 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC097713.2-201ENST00000430199 356 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 RPS18P1-201ENST00000447840 458 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 RPL36AP13-201ENST00000457490 317 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC083829.1-201ENST00000503756 657 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC010409.2-201ENST00000505780 478 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 MRPL57P6-201ENST00000506570 309 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC104057.1-201ENST00000515547 497 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 NDUFA3P2-201ENST00000531434 232 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AL138889.2-201ENST00000603883 242 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC008162.1-201ENST00000604718 254 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AL670379.4-201ENST00000605279 254 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC097381.3-201ENST00000608962 462 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC091925.2-201ENST00000625059 256 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC092724.1-201ENST00000624623 3397 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
USB1Q9BQ65 TTC41P-205ENST00000551270 3963 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 Y_RNA.29-201ENST00000362570 113 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 RN7SKP36-201ENST00000363997 312 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 RNU6-190P-201ENST00000384154 102 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 Y_RNA.462-201ENST00000384268 102 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 RNU6-393P-201ENST00000384475 107 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 Y_RNA.518-201ENST00000384552 113 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 Y_RNA.551-201ENST00000384661 102 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC110754.1-201ENST00000399740 601 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC004986.1-201ENST00000414855 607 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AL593856.1-201ENST00000419949 805 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AL606753.1-201ENST00000427435 87 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 ATP5LP4-201ENST00000434169 307 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 RPS3AP12-201ENST00000443616 753 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC243772.1-201ENST00000451620 410 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 MTCO3P8-201ENST00000453691 755 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 OR7E62P-201ENST00000456741 477 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 CYCSP34-201ENST00000458172 304 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC011005.2-201ENST00000487324 359 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC023818.1-201ENST00000498379 384 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC093852.1-201ENST00000503587 266 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USB1Q9BQ65 SNORA40.15-201ENST00000516884 107 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 OR5BK1P-201ENST00000550421 823 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC012433.1-201ENST00000588916 398 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC108451.2-201ENST00000603875 538 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 HMGN2P28-201ENST00000606102 262 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 U47924.1-201ENST00000606539 434 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.52□□□□□ -1.37
USB1Q9BQ65 AC243725.1-201ENST00000637164 436 ntBASIC6.52□□□□□ -1.37
USB1Q9BQ65 AL354702.2-202ENST00000641481 890 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms