Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 RPL21P109-201ENST00000422213 475 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 HIGD1AP12-201ENST00000427832 281 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 CBX1P1-201ENST00000440184 427 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 RPS7P5-201ENST00000441482 581 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 RPS27AP13-201ENST00000498403 237 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC008638.1-201ENST00000506035 866 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC023141.12-201ENST00000512399 199 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 NDUFB9P3-201ENST00000521269 501 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 MIR4715-201ENST00000584117 79 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 IPO5P1-202ENST00000600039 287 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AL137849.1-201ENST00000604767 169 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 RNA5SP108-201ENST00000605921 117 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC007620.3-201ENST00000608131 497 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 MIR6868-201ENST00000611215 58 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC010608.2-201ENST00000624830 470 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 AL592494.2-201ENST00000425455 1548 ntBASIC2.81□□□□□ -1.96
AP1S3Q96PC3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
AP1S3Q96PC3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 OR4A15-201ENST00000314706 1035 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 RNU1-75P-201ENST00000347264 129 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 TPT1P2-201ENST00000413105 503 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AL139128.1-201ENST00000413921 941 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 TRIAP1P1-201ENST00000427062 225 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 ELOCP6-201ENST00000429066 328 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AL353898.1-201ENST00000444055 238 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 ELOCP12-201ENST00000458706 328 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 U3.44-201ENST00000458938 192 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 UQCRHP4-201ENST00000471686 272 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 RN7SL442P-201ENST00000473804 320 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 RPL21P103-201ENST00000479921 488 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC093840.1-201ENST00000511599 336 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC087369.1-201ENST00000520775 996 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC006518.1-201ENST00000541449 943 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 NPM1P47-201ENST00000560843 856 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC011468.4-201ENST00000603942 409 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AL390816.3-201ENST00000604527 1066 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC105429.2-201ENST00000610567 517 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 MIR8059-201ENST00000620427 81 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 AC011944.2-201ENST00000624440 683 ntBASIC2.8□□□□□ -1.96
AP1S3Q96PC3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
AP1S3Q96PC3 USP8P1-201ENST00000494673 3183 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 NMD3P1-201ENST00000439704 1488 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 LARP1BP1-201ENST00000506036 1359 ntBASIC2.79□□□□□ -1.96
AP1S3Q96PC3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
AP1S3Q96PC3 IGKV7-3-201ENST00000357453 298 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms