Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC133644.2-201ENST00000608142 540 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC131235.4-201ENST00000609288 620 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC015804.1-201ENST00000622935 435 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AL513185.3-201ENST00000433335 1300 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC109315.1-201ENST00000584143 1347 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 MAPK10-286ENST00000641208 8747 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 RN7SKP149-201ENST00000363008 344 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 RNU1-82P-201ENST00000390851 165 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 RPL36AP10-201ENST00000421785 322 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL138785.1-201ENST00000425821 331 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL593851.1-201ENST00000426171 157 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL031736.2-201ENST00000426573 787 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC007559.1-201ENST00000428736 355 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL354941.1-201ENST00000438600 464 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 MTCYBP34-201ENST00000439552 670 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 IFNWP4-201ENST00000453148 294 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL109741.2-201ENST00000455561 343 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 RPS5P7-201ENST00000456664 608 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 RNU7-125P-201ENST00000458760 62 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 RPL5P24-201ENST00000463742 885 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC126121.1-201ENST00000482313 553 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC104090.1-201ENST00000506341 1171 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 PGBD4P4-201ENST00000509673 613 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC109445.1-201ENST00000512356 383 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AP001922.4-201ENST00000526967 290 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 PCNPP1-201ENST00000552501 511 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC090888.1-201ENST00000561335 1141 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 MIR5699-201ENST00000578903 90 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 MIR3934-201ENST00000579806 107 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC091488.1-201ENST00000604239 660 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC121247.2-201ENST00000604776 136 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC005084.1-201ENST00000605160 304 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AL139418.1-201ENST00000613613 177 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC124312.6-202ENST00000623624 418 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC116618.1-201ENST00000634617 774 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC007671.2-201ENST00000637344 619 ntBASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDK5RAP3Q96JB5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 RNU6-1300P-201ENST00000391046 108 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL109941.1-201ENST00000401925 229 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 MIR1302-8-201ENST00000408342 128 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 RNU2-65P-201ENST00000410162 185 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 OR2B7P-201ENST00000429302 934 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 RPS26P40-201ENST00000435209 294 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 VN1R54P-201ENST00000435210 1049 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 YWHAZP7-201ENST00000436906 631 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 HIGD1AP8-201ENST00000453927 274 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC063943.1-201ENST00000465434 453 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 RPL7P18-201ENST00000478965 734 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC073358.1-201ENST00000505671 684 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC091868.1-201ENST00000508746 304 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC008885.2-201ENST00000509506 930 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC079395.1-201ENST00000510981 262 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC010587.2-201ENST00000511727 448 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 RNU6-1225P-201ENST00000516336 65 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 RNU6-885P-201ENST00000516607 104 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms