Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC010376.1-201ENST00000522101 334 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AGGF1P6-201ENST00000569213 976 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 BPIFA4P-203ENST00000603168 689 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 YWHAQP7-201ENST00000603536 658 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AP005137.2-201ENST00000609238 400 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 MIR6862-1-201ENST00000613016 70 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 MIR6862-2-201ENST00000614755 70 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 PABPC1P7-201ENST00000413177 1513 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 NOL8P1-201ENST00000508336 3529 ntBASIC4.29□□□□□ -1.72
VPS33AQ96AX1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS33AQ96AX1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC105074.1-201ENST00000623380 3095 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC090337.1-201ENST00000579651 2074 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC021146.4-201ENST00000309229 279 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 RNU1-15P-201ENST00000353977 144 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 RNU6-839P-201ENST00000363347 108 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 RNA5SP507-201ENST00000363603 121 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 SNORD74.4-201ENST00000364129 80 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 RNU6-115P-201ENST00000364310 107 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 RNU6-921P-201ENST00000384361 107 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 RNA5SP113-201ENST00000410486 84 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 MTND4P22-201ENST00000413116 1169 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 BTF3P8-201ENST00000414577 526 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 MTCYBP32-201ENST00000427945 1084 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC005154.2-201ENST00000438110 379 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC016831.4-201ENST00000438302 307 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 SDR42E1P3-201ENST00000438345 502 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AL590399.6-201ENST00000446396 307 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AL451050.1-201ENST00000450126 415 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 DDX39BP2-208ENST00000453923 258 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC063943.1-201ENST00000465434 453 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC011352.3-201ENST00000505162 593 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AGGF1P8-201ENST00000562979 1000 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 BGLT3-201ENST00000564523 994 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC025946.2-201ENST00000603398 234 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AL139286.1-201ENST00000604465 483 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 Z98200.1-201ENST00000607298 470 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC004943.3-201ENST00000624116 600 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 AC004808.1-201ENST00000627671 721 ntBASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
VPS33AQ96AX1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
VPS33AQ96AX1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 LINC00622-201ENST00000562811 1570 ntBASIC4.27□□□□□ -1.73
VPS33AQ96AX1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS33AQ96AX1 HMGB1P5-201ENST00000255320 642 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms