Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 MAPK10-286ENST00000641208 8747 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RNA5SP52-201ENST00000362448 134 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RNU6-1339P-201ENST00000363574 91 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RNU6-560P-201ENST00000364007 108 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 Y_RNA.201-201ENST00000364052 96 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC004552.1-201ENST00000419089 348 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 MTND1P20-201ENST00000430341 950 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 MTCO3P21-201ENST00000430791 643 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 YWHAZP7-201ENST00000436906 631 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 PSMD10P3-201ENST00000437000 448 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 OR52J1P-201ENST00000450596 932 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC079168.2-201ENST00000453977 416 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AL109741.2-201ENST00000455561 343 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 CCDC75P1-201ENST00000469247 791 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RPS26P3-201ENST00000470205 348 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 BZW1P2-201ENST00000473537 826 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RPL7AP6-201ENST00000477943 801 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC090543.2-201ENST00000483963 348 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC004057.1-201ENST00000485827 348 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC021146.8-201ENST00000507455 733 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RNA5SP154-201ENST00000516193 111 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 RNU6-759P-201ENST00000516740 103 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC021006.3-201ENST00000530771 192 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AP002812.4-201ENST00000532139 286 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AP000619.3-201ENST00000535634 1127 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 POLR2KP1-201ENST00000553226 168 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC002400.1-201ENST00000569310 726 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC015912.2-201ENST00000571053 181 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC090616.2-202ENST00000584248 222 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC011487.3-201ENST00000593607 453 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AL163642.2-201ENST00000604722 1019 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 HULC.1-201ENST00000612720 240 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AC122133.1-201ENST00000613964 233 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 uc_338.9-201ENST00000617424 182 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 AF001550.2-201ENST00000636643 217 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 MTCO1P6-201ENST00000481192 1384 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 DDX43P2-201ENST00000604753 1354 ntBASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CLIP4Q8N3C7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.34□□□□□ -1.72
CLIP4Q8N3C7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
CLIP4Q8N3C7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.72
CLIP4Q8N3C7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLIP4Q8N3C7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.34□□□□□ -1.72
CLIP4Q8N3C7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
CLIP4Q8N3C7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AL442639.1-201ENST00000625030 1899 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 OR56B2P-201ENST00000317102 954 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 RNA5SP191-201ENST00000362585 102 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 RNU6-707P-201ENST00000364647 95 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 RNU6-757P-201ENST00000410334 100 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 RNU6-575P-201ENST00000411326 105 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC004074.1-201ENST00000421810 1063 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 MTCO1P3-201ENST00000429327 192 ntBASIC4.33□□□□□ -1.72
CLIP4Q8N3C7 PPIAP13-201ENST00000434706 478 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms